Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0833 ATGGAGAGCATTGCCGCGCAGTTAAAGCGCGGCATCTCGCGGCAGTTCTCGTCGGGTTCCCTCCGGAAAACCCTCAGCCGCCAGTTCACGCGGCAAGCCTCCCTCGATCCGCGCCGGAACAATCTCCGCTTCAGCTTCGGCCGCCAATCCTCCCTCGACCCGATCCGCCGCAGCCCCGTCGATGACGACGACGCTGAACTCACCGTGCCGGAGAATCTCGACTCCACCATGCAGTTACTCTTCATGGCTTGCCGTGGAGATGTTAGGGGAGTCGAGGACTTGCTCAACGAAGGCATCGATGTTAACAGCATTGACCTCGACGGTCGCACCGCGCTTCACATCGCCGCATGTGAGGGCCACGTTGAAGTCGCCGCGCTTCTTCTCAGCCGTAAGGCTAACATCGACGCTCGTGATCGTTGGGGCAGTACGCTCGTGATTCTTGATTTGCAGGCAGCGGCTGATGCAAAATACTATGGAAATACAGAGGTTTATTATATGTTGAAGGCTCGCGGAGCGAAAGTGCCGAAAACCAGGAAGACTCCAATGACTGTTGCGAATCCTCGCGAAGTTCCGGAATATGAACTCAATCCTTTGGAGCTGCAGGTTCGGAAGAGTGATGGTATTTCAAAGGGAGTGTATCAAGTAGCTAAGTGGAATGGCACAAAGGTTGCAGTGAAGATACTTGACAAGGACCATTATTCAGATCCTGAGAGAATAAATGCTTTCAAACATGAGCTCACATTATTAGAAAGGGTACGGCATCCTAATGTGGTCCAGTTTGTTGGAGCTGTCACTCAGAATATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACCTAGCAGGCTATCTTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTGCTCTTGATGTTGCTAGGGGCATGAACTATCTTCATGAGTGCAAACCCGAACCAATTATCCACTGTGATTTAAAGCCAAAAAATATTTTGCTGGATAGTGGAGGGCAATTGAAGATAGCTGGATTTGGCAATGTGACATTATCGCTAATCTCACCTGATGAAGCAAAGCTGGCAAACCCTGAGGATAACACGGATCTCCTTTCGAGCTTGTACGTGGCACCAGAGATTTACAAAGATGATGTGTTTGATAGAAGTGTGGATGCGTATTCTTTTGGTCTTATTGTGTATGAGATGATAGAGGGTACACAGCCCTTCCATCCCAGGCCTGCGGAGGAGGCTGTAAAACTGATGTGCTTAGAAAGGAAAAGACCGCAATTCAAGATCAAAACAAAAAGTTATCCTCCAGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAGAACCTGTTGTCAGGCCAACATTTTCGCAGGTCATTGTACGATTGGACAAAATTGTTGCAAATTGCTCAAAGCAAGGGTGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1455 0.4818 MESIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSPVDDDDAELTVPENLDSTMQLLFMACRGDVRGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVEVAALLLSRKANIDARDRWGSTLVILDLQAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISKGVYQVAKWNGTKVAVKILDKDHYSDPERINAFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLAGYLQKKGRLSPSKVLRFALDVARGMNYLHECKPEPIIHCDLKPKNILLDSGGQLKIAGFGNVTLSLISPDEAKLANPEDNTDLLSSLYVAPEIYKDDVFDRSVDAYSFGLIVYEMIEGTQPFHPRPAEEAVKLMCLERKRPQFKIKTKSYPPDLKELIEECWDPEPVVRPTFSQVIVRLDKIVANCSKQGWWKDTFKLPWK* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0833 484 ProSiteProfiles Ankyrin repeat region circular profile. 107 139 - -
Lja4g0833 484 SMART serkin_6 202 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0833 484 SMART ANK_2a 107 136 IPR002110 GO:0005515
Lja4g0833 484 SMART ANK_2a 75 103 IPR002110 GO:0005515
Lja4g0833 484 Gene3D Phosphorylase Kinase; domain 1 195 277 - -
Lja4g0833 484 Gene3D - 50 193 IPR036770 -
Lja4g0833 484 Gene3D Transferase(Phosphotransferase) domain 1 279 480 - -
Lja4g0833 484 ProSiteProfiles Ankyrin repeat profile. 107 139 IPR002110 GO:0005515
Lja4g0833 484 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 482 - -
Lja4g0833 484 CDD STKc_MAP3K-like 208 462 - -
Lja4g0833 484 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Lja4g0833 484 PRINTS Tyrosine kinase catalytic domain signature 313 331 IPR001245 GO:0004672|GO:0006468
Lja4g0833 484 PRINTS Tyrosine kinase catalytic domain signature 274 287 IPR001245 GO:0004672|GO:0006468
Lja4g0833 484 PRINTS Tyrosine kinase catalytic domain signature 433 455 IPR001245 GO:0004672|GO:0006468
Lja4g0833 484 ProSiteProfiles Protein kinase domain profile. 198 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0833 484 PIRSF ILK 8 483 - -
Lja4g0833 484 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 482 - -
Lja4g0833 484 SUPERFAMILY Ankyrin repeat 76 183 IPR036770 -
Lja4g0833 484 Pfam Protein tyrosine and serine/threonine kinase 210 461 IPR001245 GO:0004672|GO:0006468
Lja4g0833 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Lja4g0833 484 Pfam Ankyrin repeats (3 copies) 77 138 IPR002110 GO:0005515
Lja4g0833 484 SUPERFAMILY Protein kinase-like (PK-like) 211 462 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0833 Lja-Chr4 6938048 6942860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0833 1 483 MAP Kinase Kinase Kinase AT2G43850 77.778 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lja4g0833 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0833 - - aprc:113857978 867.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0833 4 6938048 6942860 Lja4g0833 4 6938048 6942860 ECH