Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0810 ATGGCTTTGGGAAGAGGCAGTGCAATAATGGTGCTACTTGTCTGCTTTTTGGCGCTTCACTCTGAGATGGCTCATGCTGCTACCTACACTGTTGGAGGTGCAGGAGGTTGGACCTTTAACACTGTTGGCTGGCCCAAAGGAAAGCGCTTTAGAGCTGGGGACACACTTGTGTTCAAATATGGCGCTGGGGCACACAATGTGGTGGCGGTGAACAAGGCAGCTTATGACACCTGCAAGACTCCAAGAGGAGCAAAAGTGTATCGGTCAGGGAACGATCAGATCAGGCTCACCAGAGGACAAAACTACTTCATCTGCAATTATGTCGGTCACTGCGAATCTGGAATGAAAATTGCAATCAACGCTGCTTAA 369 0.4932 MALGRGSAIMVLLVCFLALHSEMAHAATYTVGGAGGWTFNTVGWPKGKRFRAGDTLVFKYGAGAHNVVAVNKAAYDTCKTPRGAKVYRSGNDQIRLTRGQNYFICNYVGHCESGMKIAINAA* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0810 122 ProSiteProfiles Phytocyanin domain profile. 27 122 IPR003245 GO:0009055
Lja4g0810 122 Gene3D - 27 121 IPR008972 -
Lja4g0810 122 SUPERFAMILY Cupredoxins 27 121 IPR008972 -
Lja4g0810 122 PANTHER BLUE COPPER PROTEIN 8 120 IPR039391 GO:0009055
Lja4g0810 122 PANTHER BASIC BLUE-LIKE PROTEIN 8 120 - -
Lja4g0810 122 CDD Plantacyanin 27 121 IPR041844 -
Lja4g0810 122 Pfam Plastocyanin-like domain 37 115 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0810 Lja-Chr4 6760363 6762112 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0810 9 121 Phytocyanin Superfamily AT1G17800 42.735 2.20e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0810 - - gmx:100499869 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0810 4 6760363 6762112 Lja4g0810 4 6760363 6762112 ECH