Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0808 ATGGAATTTTTCTGCCAATCCTTGTTATTATTGCTGATCACCTTGATTGCATCTATCTGTATTTTGCAGAAAAGAAAACTAAGTGGCACCAAAACCTTGCCCCCAGGTAGTTTTGGGTGGCCTCTAGCAGGTGAAACTTACCAATTTTTGTTCAACAAGATTGAACATTTCCTTCATGATAGACTCCAAAAGCACTCCTCAGAGATCTTCAAGACCAAGTTACTAGGAGAGCCAACAGTGGTTCTATGTGGTCCTGGTGCAAACAAATTCATCTCCATGAATGAGCCAAAGGTTGTCAAAGTCTGGTACCTGAAGACCCAGAGAAGGTTCTTCAATCTTCCTGATCAACCACCACATGCTGCAGCTAAGCCAAACCAAGGAGCTGTAGCTTCTGCTCCAGTGAAGATCTTGGGGTTTCTGAAACCTGAAGGACTAGTTAGGTACATGGGAAGAAAGATTGAATCAATCACACACCAACATTTCATCAAACACTGGGAAGGAAAAACAGAACTGAAAGTGTACCCTTTGGTGAAGGATTTTTCCTTTGCACTGGCCTATCAATTCTACTTGGGCATTGATGCACCCCACCATGTGTCCAAATTTGGCAGCAGGTTTGATGACTTGTATTCTGGGATTTACTCAGTTCCTGTGTATTTCCCAGGCTCTGCATATTATAGGGCACTGAGGGCTGCATCTGCAATTAGGATAGAGATCCAGTGTGTTATCAAAGAGAAGATTGATGCTTTGTCCAAAGGGGAAGTTATGGATGACCTATTAGCACACATAGTTGGTGCTGAGCTGAGTGGAAAATATGTGCCAAAAATTGAAATAAGCAATGTCATCATGGGGTTGATGAATTCCAGCTACATACCAATAGCAATCACTTTGGCTTTCATGATCAAGCAAATTGGACAGAGGCTTGATATCTACCAGAAAATCTTATCCGAGCATGTTGATGTCATAAGATCTAAAGGATCTGGTGCAGCACTTGATTGGGACAGCATACAGAAAATGAAATACACATGGGCTGTTGCACAGGAAACAATGAGACTCTACCCAACTGCACCAGGAGCATTCAGAGAGGCTGTAGAAGATATCACCTTTGAAGGATTTACTATTCCAAAAGGATGGAAGATCTTTTGGGCAGTCATGGGAACAAATAAGAATCCTAATTACTTTGATGAACCTGAAAGTTTTGATCCAACGAGGTTTGAGAAGAATGTTCCTGCTCCATACACATTTATACCCTTTGGAGCAGGACCAAGAAGTTGCCCTGGAAAGGACTACACACGGTTTGTGATTCTCACTTTCATTCACAATCTCATAACCAAGTTCAAGTGGGAAGTTGTGCTTCCTGGTGAGAAAGTACATGGTGCTTTGATACCAATCCCAGCAGAGGGAATTCCTATCCGTCTTCATAGCCTTTAA 1428 0.4216 MEFFCQSLLLLLITLIASICILQKRKLSGTKTLPPGSFGWPLAGETYQFLFNKIEHFLHDRLQKHSSEIFKTKLLGEPTVVLCGPGANKFISMNEPKVVKVWYLKTQRRFFNLPDQPPHAAAKPNQGAVASAPVKILGFLKPEGLVRYMGRKIESITHQHFIKHWEGKTELKVYPLVKDFSFALAYQFYLGIDAPHHVSKFGSRFDDLYSGIYSVPVYFPGSAYYRALRAASAIRIEIQCVIKEKIDALSKGEVMDDLLAHIVGAELSGKYVPKIEISNVIMGLMNSSYIPIAITLAFMIKQIGQRLDIYQKILSEHVDVIRSKGSGAALDWDSIQKMKYTWAVAQETMRLYPTAPGAFREAVEDITFEGFTIPKGWKIFWAVMGTNKNPNYFDEPESFDPTRFEKNVPAPYTFIPFGAGPRSCPGKDYTRFVILTFIHNLITKFKWEVVLPGEKVHGALIPIPAEGIPIRLHSL* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0808 475 Pfam Cytochrome P450 215 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 SUPERFAMILY Cytochrome P450 32 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 Gene3D Cytochrome P450 23 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 PANTHER CYTOCHROME P450 26 13 473 - -
Lja4g0808 475 PRINTS E-class P450 group I signature 424 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 PRINTS E-class P450 group I signature 414 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0808 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 417 426 IPR017972 GO:0005506|GO:0016705
Lja4g0808 475 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 13 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0808 Lja-Chr4 6734800 6737627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0808 32 379 Cytochrome P450 AT5G36110 31.373 5.71e-64 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0808 K20667 - gmx:100782971 720.694