Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0807 ATGGCTTTGTTTTCACACTTTCTTCTTCATTTAGCCTTCTTAATCATTCTCCTCCCCCTTGATTTACAGAACCTTTTGGTTGGTGTATCATCAACCACTCTAAGCATCAGCTCAGACAGAGAAGCTTTGATCTCACTGAAGTCTCAGCTGAGTAATGACATCAGTACTTCTCACCCACTTTTATCCTCTTGGAGCCAGAGCTCCTCTCCTTGTAATTGGACTGGTGTCCTCTGTGACAAGCGTGGCCAAAGAGTCACTGGCTTGGACCTTTCAGGCTTTGGTCTCTCAGGCCATTTAAGCCCCCATATTGGTAACCTGTCCTCTCTTCAGACCCTCCAGTTGCAGAATAACCAGCTATCAGGAGTGATTCCTGACCAAATTGGCAACCTATTCAGTTTGAGAGTTCTAAACATGAGCTCAAACATGTTGGAAGGAGTGCTTCCTTCAAACATCACCAAATTGGAGGAGCTCCAGATTCTTGATCTGTCCTCAAACAAGATCACCAGCAGGATTCCTGAAAACATTAGCAGCTTGAAAAAGCTGCAGGTCTTGAAACTTGGAAAGAACAGCCTCTATGGTGCAATCCCAACTTCTCTAGGGAACATTTCCACTCTCAAGAATATCAGTTTTGGCACCAACTCTCTCAGTGGCTGGATTCCCAGTGAGCTGGGCAGGCTTCATGATTTGATTGAGCTTGATCTCGTTCTCAACAATCTCAATGGGACTGTTCCACCTGCTATATATAACCTGTCTTCCCTTGTTAACTTGGCCTTGGCTTCAAACTCCCTGTGGGGTGAGATTCCTCAGGATGTTGGTCAGAAACTTCCAAAACTCCTAGTGTTCAATTTCTGCTTCAATAAGTTCACTGGTAGAATTCCAGGGTCTTTGCACAACCTCACCAACATTCGAGTCATTCGTATGGCTTCCAACTTTTTGGAAGGAACAGTGCCACCTGGTTTGGGAAATCTCCCATTTCTTCACATGTATAATATTGGGGGTAACAGGATTGTCAGCAACACAGGTCTGGATTTCATTACTTCTTTGGCAAACAGCACCCACCTGAACTTTCTGGCAATTGATGGCAATATGCTGGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCCAAGGATCTCTCAATACTTTACATGGGACAGAATCGTTTCAATGGAAGCATACCCTCCTCCATTGGCCTTCTCAGTGGCTTAAAGTTGTTAAACTTGTGCTACAATTCATTCACTGGAGAAATCCCACAGGAGTTAGGCCAGTTAAAGAAACTACAAGAGCTATCTCTGGCTGGAAATCAGATATCAGGTGAAATTCCAAATTCCCTTGGTAATCTCCATAAGTTGATCCAAATTGATTTGTCAAGGAATAATCTTGTGGGTAGCATTCCCATCAGTTTTGGGAATTTTCAAAACCTGCTCTACCTGGACTTATCCAACAACAAGCTCAATGAAAGCATACCTGTGGAAATCCTCAACCTCCCAACTTTGAGCAATGTTTTGAACTTGTCAATGAACTTGTTGAGTGGACCAATACCACAAGTTGGGAAATTGATCAGTGTTTCCTCCATTGACTTTTCTAACAACCAGTTGAATGGTAGCATCCCCAGCTCATTCAGCAGTTGCTTGAGCTTGGAAAAGTTGTTTTTGGCCAGGAATCTTCTTTCAGGTCCCATTCCAAAAACTTTTGGAGATCTAAGAGCCTTGGAAACCTTGGACCTGTCCTCTAACAAACTCTCTGGGTCCATTCCTATTGAACTTCAAAATCTTCATGTTCTTCAGCTTTTAAACCTCTCTTACAATGATTTAGATGGAACCATTCCAGTTTTCAAAAATATCTCTGATGTTCACTTGGAAGGCAATAGAAATCTCTGCTATTCAACATGTGTGCCTCATGGCCATGGAAGAAGAAATGCTAGGCTTTACATCATCATAGCAATCGCGGTAACATTGATACTATGTCTCACCACAATTGGTTTTTTGCTATACATAAAGAACAGCAAGGTGAAGGTAACAGCAGCAGAACCTGAACTGCTAAAGTCTCATCATGCTCCAATGGTCTCCTATGAAGAGCTTCGTTTAGCAACTGAAGAGTTCAGCCAGGAGAATTTAATAGGAGTTGGAAGCTTTGGCTCAGTGTATAAAGGCCATCTAAGTCATGGAAAAACTGTTGCTGTGAAAGTGCTTGACACTCTAAGAACTGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAAACTATGAAGAACTCAAGGCATCGGAATCTGGTTAAGGTGATCACATCATGCTCCAGTCTTGACTTAAAACACAATGATTTTCTGGCTCTGGTGTATGAGTACTTGAGTAATGGGAGCTTGGATGATTGGATTAAGGGGATAAGAAAGCATGCAAGTGGAAATGGGTTGAGCCTCATGGAGAGACTGAATGTAGCTATTGATGTTGCTTGTGCATTGGATTATCTACACAATGATAGTGAAAATCCTATCGTGCATTGTGATTTGAAGCCCAGCAACATTCTCCTGGATGGAGACATGACTGCAAAAGTTGGAGACTTTGGATTGGCCAGGTTACTGATTCAAACATCAACTAATAGTCAAGTTTCCATTAGCTCAACTCATGTCCTCAGGGGTTCCATTGGTTACATACCTCCAGAGTATGGATGGGGGGAGAAACCATCTGCAGCTGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAACTCTTATCTGGGAAAAGCCCAACAGATGAGTGCTTCATGGGAGGCCTAAGTATAACAAAATGGGTGCAGTCAGGATTCAAAGACAAGACTGTTCAAGTCATTGATCCTCAGCTGCTATCCCTCATTTTCTGTGATGAAGACCCTTCTGCTGCAGCTAAAGGTCCCAATATACAACTCCCTTGCTTGAATGCAATTATAGGAGTTGGCCTATCCTGCACTGCAAACAACCCAGATGAACGCATTGGCATTAGAGATGTTGTTCGCCAACTAAAAGCTGCTAGAGATTCTCTTTCGAAAAATGATGCTGACATTGAAAGTCCTTCTAGTACTACTGCCAAGTGTTACTATGAAGTTTCAGTAAATTGA 3090 0.4246 MALFSHFLLHLAFLIILLPLDLQNLLVGVSSTTLSISSDREALISLKSQLSNDISTSHPLLSSWSQSSSPCNWTGVLCDKRGQRVTGLDLSGFGLSGHLSPHIGNLSSLQTLQLQNNQLSGVIPDQIGNLFSLRVLNMSSNMLEGVLPSNITKLEELQILDLSSNKITSRIPENISSLKKLQVLKLGKNSLYGAIPTSLGNISTLKNISFGTNSLSGWIPSELGRLHDLIELDLVLNNLNGTVPPAIYNLSSLVNLALASNSLWGEIPQDVGQKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMASNFLEGTVPPGLGNLPFLHMYNIGGNRIVSNTGLDFITSLANSTHLNFLAIDGNMLEGVIPETIGNLSKDLSILYMGQNRFNGSIPSSIGLLSGLKLLNLCYNSFTGEIPQELGQLKKLQELSLAGNQISGEIPNSLGNLHKLIQIDLSRNNLVGSIPISFGNFQNLLYLDLSNNKLNESIPVEILNLPTLSNVLNLSMNLLSGPIPQVGKLISVSSIDFSNNQLNGSIPSSFSSCLSLEKLFLARNLLSGPIPKTFGDLRALETLDLSSNKLSGSIPIELQNLHVLQLLNLSYNDLDGTIPVFKNISDVHLEGNRNLCYSTCVPHGHGRRNARLYIIIAIAVTLILCLTTIGFLLYIKNSKVKVTAAEPELLKSHHAPMVSYEELRLATEEFSQENLIGVGSFGSVYKGHLSHGKTVAVKVLDTLRTGSLKSFFAECETMKNSRHRNLVKVITSCSSLDLKHNDFLALVYEYLSNGSLDDWIKGIRKHASGNGLSLMERLNVAIDVACALDYLHNDSENPIVHCDLKPSNILLDGDMTAKVGDFGLARLLIQTSTNSQVSISSTHVLRGSIGYIPPEYGWGEKPSAAGDVYSFGIVLLELLSGKSPTDECFMGGLSITKWVQSGFKDKTVQVIDPQLLSLIFCDEDPSAAAKGPNIQLPCLNAIIGVGLSCTANNPDERIGIRDVVRQLKAARDSLSKNDADIESPSSTTAKCYYEVSVN* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0807 1029 Pfam Protein kinase domain 702 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0807 1029 SMART serkin_6 701 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0807 1029 ProSiteProfiles Leucine-rich repeat profile. 156 179 IPR001611 GO:0005515
Lja4g0807 1029 SUPERFAMILY L domain-like 37 339 - -
Lja4g0807 1029 ProSitePatterns Protein kinases ATP-binding region signature. 707 729 IPR017441 GO:0005524
Lja4g0807 1029 ProSiteProfiles Protein kinase domain profile. 701 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0807 1029 PANTHER OS04G0122200 PROTEIN 25 1005 - -
Lja4g0807 1029 CDD STKc_IRAK 707 999 - -
Lja4g0807 1029 PRINTS Leucine-rich repeat signature 475 488 - -
Lja4g0807 1029 PRINTS Leucine-rich repeat signature 568 581 - -
Lja4g0807 1029 Gene3D Phosphorylase Kinase; domain 1 671 781 - -
Lja4g0807 1029 Gene3D Ribonuclease Inhibitor 34 239 IPR032675 -
Lja4g0807 1029 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Lja4g0807 1029 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 25 1005 - -
Lja4g0807 1029 SUPERFAMILY Protein kinase-like (PK-like) 682 998 IPR011009 -
Lja4g0807 1029 Pfam Leucine rich repeat 402 461 IPR001611 GO:0005515
Lja4g0807 1029 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Lja4g0807 1029 Pfam Leucine rich repeat 108 167 IPR001611 GO:0005515
Lja4g0807 1029 Gene3D Ribonuclease Inhibitor 336 634 IPR032675 -
Lja4g0807 1029 ProSiteProfiles Leucine-rich repeat profile. 570 593 IPR001611 GO:0005515
Lja4g0807 1029 Gene3D Transferase(Phosphotransferase) domain 1 782 1022 - -
Lja4g0807 1029 ProSiteProfiles Leucine-rich repeat profile. 474 495 IPR001611 GO:0005515
Lja4g0807 1029 SMART LRR_sd22_2 424 450 - -
Lja4g0807 1029 SMART LRR_sd22_2 226 252 - -
Lja4g0807 1029 SMART LRR_sd22_2 472 498 - -
Lja4g0807 1029 SMART LRR_sd22_2 568 589 - -
Lja4g0807 1029 SMART LRR_sd22_2 178 204 - -
Lja4g0807 1029 SMART LRR_sd22_2 154 177 - -
Lja4g0807 1029 Gene3D Ribonuclease Inhibitor 240 335 IPR032675 -
Lja4g0807 1029 SUPERFAMILY L domain-like 379 628 - -
Lja4g0807 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Lja4g0807 1029 SMART LRR_typ_2 154 178 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 472 496 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 250 274 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 299 323 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 568 591 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 520 544 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 424 448 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 106 130 IPR003591 -
Lja4g0807 1029 SMART LRR_typ_2 592 614 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0807 Lja-Chr4 6714076 6718073 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0807 9 1015 Receptor kinase-like Gene Family AT5G20480 40.598 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lja4g0807 Pkinase 1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0807 - - gmx:100783512 1511.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0807 4 6714076 6718073 Lja4g0807 4 6714076 6718073 ECH