Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0806 ATGGGGAACTCATATTTGGCACATTTGGTGGTTTTGTTGAGTTTCTTGGGGATGCTACTAACACCTTCCTCATGTCAAGATGATTCGGATGAATATGATGCAACTACTGCTGTCTACATTGTTACTCTCAAACAAGCCCCTACGTCTCACAATCAGGATGCGTTGACCAGAGTAATTGGTCACCACTTCAGAAATGGTGTTTCTAGGAGAAATAGACATCACAGAACAAGAAATCAAAATGTTTCACAGATAGATCGGAGGCCTGGCTCTAACATTGCCAGAGTTCACGATGCGTGGTTGAAAAAGGTGTTGAAAGGGGAGAAATATCTGAAGCTCTATAGCTATCATTACTTGATTAATGGATTTGCTGTGCTAATTACTCAACAGCAGGCAGAGAAGCTCTCAAGGAGAAGAGCAGTGTCCAATGTGGTTCTGGATTTTTCTGTAAGAACTGCAACCACCTACACTCCACAATTTTTAGGACTTCCACAGGGAGCTTGGCTTCAATCAGGTTCAGGAGGATTTGAAACTGCTGGTGAAGGAATCACTATTGCATTTGTTGACACTGGCATTGATCCTACACACCCTAGTTTTGCTGATGATAGATCTGAACATCCATTCCATGTTCCTGCTCGTTTTTCTGGTACCTGTGAGGTTACTCGGGATTTTCCATCTGGTTCTTGCAATGGGAAACTTGTTGGGGCCCGTCATTTTGCAGAATCTGCTATAGCCAGAGGAGTGTTTGATTCAACTCAGGACTATGCTTCTCCTTTTGATGGCGATGGCCATGGCACGCACACAGCTTCTGTTGCAGCTGGAAACCATGGAATCCCAGTGGTTGTTGCTGGGCATCATTTTGGAAATGCTAGTGGGATGGCTCCTCGTTCGCATATTGCTGTTTACAAGGCATTATACAAGAGACTGGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGATCAGGCAGCTCAGGATGCTGTTGACATAATATGCTTGTCAATCGCTCCTAATAGGCGTCCTCCTGATATTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTCTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCTGGAAATACTGGACCAGGACCTTTGAGCATGTCCTCCTTTAGTCCATGGATCTTTACCATTGGTGCTGCCTCTCATGACAGAGTTTATAGCAACTCCCTATCTCTTGGAAATAATTTGACCATACTTGGAGTTGGACTTGCACCTGGCACAGATGAGAACACAATGTATAAATTGATTTATGCGCAACATGCTTTGATCAATGGCACAACAGTTGCTGATGACATGTATGTTGGTGAGTGTCAAGATGCAAGTGATTTGAATAAGGGTTTGATCCAGGGCAACCTCCTGATCTGTAGTTATTCAATCAGATTTGTTCTTGGGCTCTCCACTGTCCAACAGGCCTTAGAAACAGCAATGAGCCTTAGTGCGGTTGGTGTTGTCTTTACCATGGGCCCTTTAGTGGTTGATTTTCAGCTTAACCCAGTTCCAATGAAAATGTCCAGCATAATAATTCCATCTGCAAAAGATTCCAAGATATTACTAGAATACTACAATTCTTCACTGGAAAAAGATGGGGCTTCAAAAGAAATTGTTAATTTTGGGGCTGTTGCTAGCATTTGTGGTGGACTAGAAGCCAATTATAATAATGCTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGTGGACAGTTTTCCACACGAAGCTGATATTATGAAACCCAATCTGGTAGCTCCGGGAAATTCTATATGGGCTGCTTGGAGTTCTCTTGCTACTGATTCAGATGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAATTAAGCAAAAGTTCCCCAATTTCAGTCCTGCCGCCATTGGATCTGTTCTTTCCACCACAGCTTCTCTGTTTGACAACAATGGGAAGCCAATAATGGCTCAGCGATCGTATCCCTCCCCTGAACTAAACCAATCTCCGGCAACTCCCTTTGACATGGGAAGTGGTTTTGTGAATGCTACTGCAGCATTGAATCCTGGTTTGCTTTTTGATTCTGGTTATGATGATTACATGTCATTTCTATGTGCTATCAATGGTTCAGCTCTGGCAGTGCTGAAGTACACCAGTCAAAGCTGCTGGATGTATAATGCTACTGTGTATGGCTCTGATCTGAACTTGCCCTCAATCACAATAGCAAAGCTGAACCAATCTAGAGTAGTGCAGAGAACAGTCCAAAACATTGCTGGAAATGAAACTTACAATGTTGGTTGGAGTTCTCCATATGGGGTTTCAGTGAAAGTATCTCCAACTCAATTCTCTCTTGCCAGTGGGGAGAAACAAGTCTTGTCTGTGATCTTTACCGCAACCAGTAACAGCTCTGCTGCCAGCTTTGGGAGGATTGGACTGTTTGGTAGCCAAGGTCATGTAGTCAACATTCCAGTGTCGGTTATCATTAAATATCATAACTTCACTATGAGCTAA 2556 0.4339 MGNSYLAHLVVLLSFLGMLLTPSSCQDDSDEYDATTAVYIVTLKQAPTSHNQDALTRVIGHHFRNGVSRRNRHHRTRNQNVSQIDRRPGSNIARVHDAWLKKVLKGEKYLKLYSYHYLINGFAVLITQQQAEKLSRRRAVSNVVLDFSVRTATTYTPQFLGLPQGAWLQSGSGGFETAGEGITIAFVDTGIDPTHPSFADDRSEHPFHVPARFSGTCEVTRDFPSGSCNGKLVGARHFAESAIARGVFDSTQDYASPFDGDGHGTHTASVAAGNHGIPVVVAGHHFGNASGMAPRSHIAVYKALYKRLGGFAADVVAAIDQAAQDAVDIICLSIAPNRRPPDIATFFNPIDMALLSAVKAGIFVVQAAGNTGPGPLSMSSFSPWIFTIGAASHDRVYSNSLSLGNNLTILGVGLAPGTDENTMYKLIYAQHALINGTTVADDMYVGECQDASDLNKGLIQGNLLICSYSIRFVLGLSTVQQALETAMSLSAVGVVFTMGPLVVDFQLNPVPMKMSSIIIPSAKDSKILLEYYNSSLEKDGASKEIVNFGAVASICGGLEANYNNAAPKVMYYSARGPDPVDSFPHEADIMKPNLVAPGNSIWAAWSSLATDSDEFLGENFAMMSGTSMAAPHVAGLAALIKQKFPNFSPAAIGSVLSTTASLFDNNGKPIMAQRSYPSPELNQSPATPFDMGSGFVNATAALNPGLLFDSGYDDYMSFLCAINGSALAVLKYTSQSCWMYNATVYGSDLNLPSITIAKLNQSRVVQRTVQNIAGNETYNVGWSSPYGVSVKVSPTQFSLASGEKQVLSVIFTATSNSSAASFGRIGLFGSQGHVVNIPVSVIIKYHNFTMS* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0806 851 CDD PA_subtilisin_like 400 535 - -
Lja4g0806 851 Pfam Subtilase family 179 665 IPR000209 GO:0006508|GO:0008236
Lja4g0806 851 ProSiteProfiles Serine proteases, subtilase domain profile. 157 702 - -
Lja4g0806 851 Gene3D Peptidase S8/S53 domain 181 715 IPR036852 GO:0004252|GO:0006508
Lja4g0806 851 SUPERFAMILY Subtilisin-like 152 706 IPR036852 GO:0004252|GO:0006508
Lja4g0806 851 CDD Peptidases_S8_3 152 661 IPR034197 -
Lja4g0806 851 Pfam Fibronectin type-III domain 748 841 IPR041469 -
Lja4g0806 851 MobiDBLite consensus disorder prediction 66 87 - -
Lja4g0806 851 PRINTS Subtilisin serine protease family (S8) signature 259 272 IPR015500 -
Lja4g0806 851 PRINTS Subtilisin serine protease family (S8) signature 179 198 IPR015500 -
Lja4g0806 851 PRINTS Subtilisin serine protease family (S8) signature 624 640 IPR015500 -
Lja4g0806 851 Pfam Peptidase inhibitor I9 38 152 IPR010259 -
Lja4g0806 851 ProSitePatterns Serine proteases, subtilase family, serine active site. 625 635 IPR023828 -
Lja4g0806 851 Gene3D - 394 562 - -
Lja4g0806 851 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 23 844 IPR045051 -
Lja4g0806 851 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 184 195 IPR023827 -
Lja4g0806 851 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 23 844 - -
Lja4g0806 851 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 150 IPR037045 -
Lja4g0806 851 Gene3D - 719 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0806 Lja-Chr4 6702031 6713667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0806 1 844 Subtilisin-like Serine Gene Family AT4G20430 66.354 0.0 1129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0806 - - gmx:100814065 1304.66