LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g0798	ATGTTAGACAACGGTGGTGGTTGTGGTGGTGCACGTGACTCTGAGGTGAGTTTAGAGACTGTGAATTCGAATCAGACTCAGAGAAGCTCAATGAGCAGTGAGAGCATGTGCAGCACCAGCTTCAGCCGTCTTTCCTTCGACCTCCTGCCGGCTTCGCCGGAGAGTCTCTCACTCAAACCTCACCGCTCCTCCGACTTCGCCTACTCCGCCACTTTCCGCCGTAAATCCGCCCTCACGTTCCGCGACTTCCACCTCCTCCGCCGAATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAGTAACTCCAACCACAAACTCGACAACGACGAGCAAGGTGTAGAAGAAGAGGACTGCTTGTACGCCATGAAGGTGGTGGACAAGGACGCCGTGGCGTTGAAGAACAAAGCGCAGAGAGCAGAAATGGAACGGAAGATCTTGAAAATGCTTGATCATCCTTTCCTTCCTACTCTCTACGCTGAGTTCGAAGCCTCTCATTTCTCTTGCATTGTCATGGAGTTTTGCTCCGGCGGAGACTTGCATTCCCTCCGCCACAAACAACCTAATAACCGTTTTCCCTTATCTTCCGCGAGATTTTACGCGGCGGAGGTACTGGTGGCGTTGGAGTACCTACACATGCTGGGAATCATATACAGAGATCTGAAGCCGGAGAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCACTCTGCTCAGACGCAATCCCCGCCGTTGAATCCTCAGATTGCTTACACGATGCCGCGTTTCCACCTGCATTGCCCTACACTCGTTCACGGAGTTCCCTAATCACTCCCTTCTCATGCTTCTCTAACCGCCTCTTCCGGTCCCGCAAGGTCCAGACGGTCCAACCGAACCGCCTCTTCGTCGCGGAACCGGTCTCCGCCAGGTCATGCTCTTTTGTCGGGACTCACGAGTACGTCTCGCCTGAGGTCGCCGCCGGGAGGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTCGGGATATTCATCTACGAGCTTATCTACGGTCGCACTCCGTTTGCGGCTCCATCGAATGAGGCTACACTGCGGAGCATCTTAAAGAAGCCTCTGACGTTTCCCACTGCCGCGCCTTCAAGCGCGCTTGAGGTCCACGCGCGGGATCTTATAACCGGGTTGCTGGACAAAGATCCGGCGAATAGGCTCGGGTCGAAGCGCGGCGCCGCTGACATCAAGAAGCATCCGTTCTTCAAAGAGCTCAACCTGGCACTGATTCGTATGATGGCGCCGCCTCGTGTTCCCGGCTCGAGAAGGCAGAAAACGACGTCGTGTAACGCTATGAAACAGCAACCGACGGCGTCGTTTGGTTATTACTTTTGA	1386	0.5541	MLDNGGGCGGARDSEVSLETVNSNQTQRSSMSSESMCSTSFSRLSFDLLPASPESLSLKPHRSSDFAYSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRSNSNHKLDNDEQGVEEEDCLYAMKVVDKDAVALKNKAQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPNNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDCLHDAAFPPALPYTRSRSSLITPFSCFSNRLFRSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGRSHGNAVDWWSFGIFIYELIYGRTPFAAPSNEATLRSILKKPLTFPTAAPSSALEVHARDLITGLLDKDPANRLGSKRGAADIKKHPFFKELNLALIRMMAPPRVPGSRRQKTTSCNAMKQQPTASFGYYF*	462

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lja4g0798	461	PANTHER	SERINE/THREONINE KINASE FAMILY PROTEIN	10	457	-	-
Lja4g0798	461	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	219	231	IPR008271	GO:0004672\|GO:0006468
Lja4g0798	461	PANTHER	FLIPPASE KINASE 1-RELATED	10	457	-	-
Lja4g0798	461	Gene3D	Transferase(Phosphotransferase) domain 1	178	245	-	-
Lja4g0798	461	ProSiteProfiles	Protein kinase domain profile.	83	419	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lja4g0798	461	SMART	serkin_6	83	419	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lja4g0798	461	SUPERFAMILY	Protein kinase-like (PK-like)	68	441	IPR011009	-
Lja4g0798	461	Coils	Coil	126	153	-	-
Lja4g0798	461	Gene3D	Phosphorylase Kinase; domain 1	81	177	-	-
Lja4g0798	461	MobiDBLite	consensus disorder prediction	16	34	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja4g0798	Lja-Chr4	6599227	6600890	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja4g0798	13	460	AGC Kinase Gene Family	AT2G34650	63.377	0.0	561

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Lja4g0798		Pkinase	1e-30	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g0798	-		-	gmx:100815648	691.034

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g0798	4	6599227	6600890	Lja4g0798	4	6599227	6600890	ECH

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