Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0798 ATGTTAGACAACGGTGGTGGTTGTGGTGGTGCACGTGACTCTGAGGTGAGTTTAGAGACTGTGAATTCGAATCAGACTCAGAGAAGCTCAATGAGCAGTGAGAGCATGTGCAGCACCAGCTTCAGCCGTCTTTCCTTCGACCTCCTGCCGGCTTCGCCGGAGAGTCTCTCACTCAAACCTCACCGCTCCTCCGACTTCGCCTACTCCGCCACTTTCCGCCGTAAATCCGCCCTCACGTTCCGCGACTTCCACCTCCTCCGCCGAATCGGCGCCGGCGACATCGGCACCGTCTACCTCTGCCGCCTCCGCAGTAACTCCAACCACAAACTCGACAACGACGAGCAAGGTGTAGAAGAAGAGGACTGCTTGTACGCCATGAAGGTGGTGGACAAGGACGCCGTGGCGTTGAAGAACAAAGCGCAGAGAGCAGAAATGGAACGGAAGATCTTGAAAATGCTTGATCATCCTTTCCTTCCTACTCTCTACGCTGAGTTCGAAGCCTCTCATTTCTCTTGCATTGTCATGGAGTTTTGCTCCGGCGGAGACTTGCATTCCCTCCGCCACAAACAACCTAATAACCGTTTTCCCTTATCTTCCGCGAGATTTTACGCGGCGGAGGTACTGGTGGCGTTGGAGTACCTACACATGCTGGGAATCATATACAGAGATCTGAAGCCGGAGAACGTGTTGGTCAGATCAGACGGTCACATCATGCTTTCTGATTTCGATCTCTCACTCTGCTCAGACGCAATCCCCGCCGTTGAATCCTCAGATTGCTTACACGATGCCGCGTTTCCACCTGCATTGCCCTACACTCGTTCACGGAGTTCCCTAATCACTCCCTTCTCATGCTTCTCTAACCGCCTCTTCCGGTCCCGCAAGGTCCAGACGGTCCAACCGAACCGCCTCTTCGTCGCGGAACCGGTCTCCGCCAGGTCATGCTCTTTTGTCGGGACTCACGAGTACGTCTCGCCTGAGGTCGCCGCCGGGAGGTCGCACGGCAACGCCGTGGACTGGTGGTCGTTCGGGATATTCATCTACGAGCTTATCTACGGTCGCACTCCGTTTGCGGCTCCATCGAATGAGGCTACACTGCGGAGCATCTTAAAGAAGCCTCTGACGTTTCCCACTGCCGCGCCTTCAAGCGCGCTTGAGGTCCACGCGCGGGATCTTATAACCGGGTTGCTGGACAAAGATCCGGCGAATAGGCTCGGGTCGAAGCGCGGCGCCGCTGACATCAAGAAGCATCCGTTCTTCAAAGAGCTCAACCTGGCACTGATTCGTATGATGGCGCCGCCTCGTGTTCCCGGCTCGAGAAGGCAGAAAACGACGTCGTGTAACGCTATGAAACAGCAACCGACGGCGTCGTTTGGTTATTACTTTTGA 1386 0.5541 MLDNGGGCGGARDSEVSLETVNSNQTQRSSMSSESMCSTSFSRLSFDLLPASPESLSLKPHRSSDFAYSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRSNSNHKLDNDEQGVEEEDCLYAMKVVDKDAVALKNKAQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKQPNNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDCLHDAAFPPALPYTRSRSSLITPFSCFSNRLFRSRKVQTVQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGRSHGNAVDWWSFGIFIYELIYGRTPFAAPSNEATLRSILKKPLTFPTAAPSSALEVHARDLITGLLDKDPANRLGSKRGAADIKKHPFFKELNLALIRMMAPPRVPGSRRQKTTSCNAMKQQPTASFGYYF* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0798 461 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 10 457 - -
Lja4g0798 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lja4g0798 461 PANTHER FLIPPASE KINASE 1-RELATED 10 457 - -
Lja4g0798 461 Gene3D Transferase(Phosphotransferase) domain 1 178 245 - -
Lja4g0798 461 ProSiteProfiles Protein kinase domain profile. 83 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0798 461 SMART serkin_6 83 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0798 461 SUPERFAMILY Protein kinase-like (PK-like) 68 441 IPR011009 -
Lja4g0798 461 Coils Coil 126 153 - -
Lja4g0798 461 Gene3D Phosphorylase Kinase; domain 1 81 177 - -
Lja4g0798 461 MobiDBLite consensus disorder prediction 16 34 - -
Lja4g0798 461 Pfam Protein kinase domain 313 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0798 461 Pfam Protein kinase domain 83 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0798 461 CDD STKc_phototropin_like 81 436 - -
Lja4g0798 461 Gene3D Transferase(Phosphotransferase) domain 1 312 437 - -
Lja4g0798 461 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0798 Lja-Chr4 6599227 6600890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0798 13 460 AGC Kinase Gene Family AT2G34650 63.377 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lja4g0798 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0798 - - gmx:100815648 691.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0798 4 6599227 6600890 Lja4g0798 4 6599227 6600890 ECH