Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0771 ATGGGTGTGTTCACATTCGTTCTCCGCAACTCCGGCGGCGACTGGTTCGCCAAGCAACACTCCGGCGACATCGAGGCCTCCGCTGACTCCACCTTCGCTCTCCAACGGAAGCTCATTCAAGCCGCTCTCGCCGTCGATTCCTCCGGTGGCGTTCAGTCCTCCTACTCTCCCGTTTCTCCTACCTCTGCTGTCTTCCAGGTGATTGTTGGTGGTGCTGCGGTTGTTGCTAGAGTTGGTGGTGCTGCTGCTGCAGGAGGTGCTGCCCCGGCTGAGGCTGCCCCAGCTGCAGAGAAGAAGAAAGAGGAAAAGGTCGAGGAATCTGATGAAGAAGATTACGGCGGCTTGTCACTCTTTGACGACGAGTAG 366 0.5792 MGVFTFVLRNSGGDWFAKQHSGDIEASADSTFALQRKLIQAALAVDSSGGVQSSYSPVSPTSAVFQVIVGGAAVVARVGGAAAAGGAAPAEAAPAAEKKKEEKVEESDEEDYGGLSLFDDE* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0771 121 MobiDBLite consensus disorder prediction 107 121 - -
Lja4g0771 121 MobiDBLite consensus disorder prediction 85 121 - -
Lja4g0771 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 - -
Lja4g0771 121 Pfam 60s Acidic ribosomal protein 67 118 - -
Lja4g0771 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 119 IPR044252 GO:0003735|GO:0005840
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0771 Lja-Chr4 6426352 6428046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0771 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 72.464 8.18e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0771 K02942 - gmx:100804776 110.538