Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0770 ATGTCCAAACCGTGGGGTAACATCGGAGCATGGGCGGCGGATTCCGAACGCGCCGAGGAGGAGGAGCGTGAAGCCACGGCGGCCGCCGAGTCGCAAAGCTTCCCCAGTCTGAAAGAGGCTGTGACTGTCAAACCCAAGAAGGGCAAGAAGATGACGCTCTCGGAGTTTAACATGGGCGGTTTCAATTCCTCTGGCGTTGAGAAACTCACGCCGGCTGAGATGCTCCGTCTTCCTACCGGTCCTAAGGAGCGTTCCGCCGAGGAAATGCAGTCCAGCCGCTACGGCGGCGGAGGATTCTCGTCGTTTGATCGTGGGAGTCGCAGGCCGGAGCGTGATGGTGATGGTTCTTGGGGTGCTGGGAGGAGATCTTACGGCGGATTCGACGATGAGCGTAGGGGTCCTCCTAGTTCTAGGGTTTCGGAACTCGATCAGCCGTCGAGGGCTGATGAGGTGGATAATTGGGCGTCGATGAAGAAATCTCTCCCGTCTCTTGATTCCGGCCGGGGGAATCGATATGGTGGCGGGGGTGGTGGTGGTGGCGGTGGGTTTGGTGCAGGTGGTGGTGGTGGTTTCGGTGCTGGTGGTGGAGGTGGTGGGTTTGGGGGAGGGTCCAGGGCTGATGGGGTGGATAATTGGATGTCTGGGAAGAAGCCTCTTCCGTCTACTGCTCCTCCTCCTGCCAGATCTTCTGGTTATTCTGGTTTTCGCGATTCTGGTGGCGACCCCGATCGGTGGCCGAGGCGTGAAATGGAGCCTGACCGTGAGAGGCCAAGGTTGGTGCTGGATCCGCGGAAGGGTGATGGTTCTGTGAATGAAACTCCTCCCGCAATGACGAATAAGCCGAGTCCGTTTGGTGCTGCTAGGCCTAGGGAGGAGGTGTTGGCGCAGAAGGGATTGGATTGGAAGAAGCTGGATTCTGAAATTGAGGCGAAGAAGGCTACAAGTAGGCCCACGAGTTCTCACTCCACCACCAGCAGGCCTTCCAGTTCTGAGGGTCCAGATGCTGTGCTGAAACCAAGGCCGAAGGTGAACCCCTTTGGGGAAGCCAAACCAAGGGAGGTTTTGCTCGCCGAGCGAGGTGCTGATTGGCGTAAGATTGATCTTGAATTGGAGCGTCGCGGGGTTGACAGGCCTGAGACGGAGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTCGAGAAAGAGCCTAAAATGAATTCAAATCAGGAATCTGCTGATGAGGCTGGTGCAAATCAAACTGGTGCGCATGCACTGTTACTACAAAAAGAAAGGGAGCTGGAACTTCTTATCCATGATTTAGATGACAAAGTTCGTTTTGGGCAGAAAGCTGTTGATAGGCCAGGTTCATCAGCAGGAAGGACTCCTGTTTTATCTGATAGGCCGCCATCTCGCTCTGGCTCATTTGAGGATTCCAGAAGTGTGGATTTTTCAGACCGCCCTCGATCCCGCGGCACAGGAGATGCTTGGATGCGTCCTAGTGACGACCGAAGACAGTTTCAAGGTAGCAGGGAACGAGGGTTTTTTTCAGGCAGCAGAGACATGGATAGCAGGTCAAGGTCAAGAGAAAGATGGTGA 1590 0.5459 MSKPWGNIGAWAADSERAEEEEREATAAAESQSFPSLKEAVTVKPKKGKKMTLSEFNMGGFNSSGVEKLTPAEMLRLPTGPKERSAEEMQSSRYGGGGFSSFDRGSRRPERDGDGSWGAGRRSYGGFDDERRGPPSSRVSELDQPSRADEVDNWASMKKSLPSLDSGRGNRYGGGGGGGGGGFGAGGGGGFGAGGGGGGFGGGSRADGVDNWMSGKKPLPSTAPPPARSSGYSGFRDSGGDPDRWPRREMEPDRERPRLVLDPRKGDGSVNETPPAMTNKPSPFGAARPREEVLAQKGLDWKKLDSEIEAKKATSRPTSSHSTTSRPSSSEGPDAVLKPRPKVNPFGEAKPREVLLAERGADWRKIDLELERRGVDRPETEEEKLLKEEIDNLKKELEKEPKMNSNQESADEAGANQTGAHALLLQKERELELLIHDLDDKVRFGQKAVDRPGSSAGRTPVLSDRPPSRSGSFEDSRSVDFSDRPRSRGTGDAWMRPSDDRRQFQGSRERGFFSGSRDMDSRSRSRERW* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0770 529 MobiDBLite consensus disorder prediction 444 529 - -
Lja4g0770 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 1 529 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 240 265 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 315 331 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 293 314 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 476 529 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 124 154 - -
Lja4g0770 529 Pfam Plant specific eukaryotic initiation factor 4B 1 511 IPR010433 GO:0003743
Lja4g0770 529 Coils Coil 380 400 - -
Lja4g0770 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 529 IPR010433 GO:0003743
Lja4g0770 529 MobiDBLite consensus disorder prediction 396 421 - -
Lja4g0770 529 MobiDBLite consensus disorder prediction 1 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0770 Lja-Chr4 6412596 6418543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0770 1 529 Eukaryotic Initiation Factors Gene Family AT3G26400 52.028 2.87e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0770 - - gmx:100784238 573.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0770 4 6412596 6418543 Lja4g0770 4 6412596 6418543 ECH