Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0749 ATGGAAGAACGGTATGAGATCATCAAAGATATTGGGTCAGGAAACTTTGGTGTGGCAAAACTGGTAAGGGAGAAATGGAGTGGTGAGTTATATGCTGTCAAGTTCATCGAGAGAGGCTTCAAGATTGATGAGCACGTGCAAAGGGAGATCATAAATCATAGGTCCTTGAAGCATCCCAACATCGTTAGATTTAAAGAGGTGTTAATTACTCCAACTCATTTAGCAATTGTGATGGAATATGCTGCAGGGGGAGAACTATTTGAAAGAATATGCAGTGCTGGTAGATTCAGTGAGGACGAGGCAAGATATTTCTTCCAGCAATTGATTTCTGGTGTCAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGTTGGAAAACACACTTTTAGATGGAAGCTCAGCACCCAGGCTCAAAATCTGTGACTTTGGTTACTCAAAGTCATCTGTTCTGCACTCTCAGCCAAAATCTACAGTAGGAACCCCTGGATATATTGCACCTGAGGTCCTATCAAGAAGAGAATATGATGGCAAGGTAGCAGATGTTTGGTCTTGTGGGGTGACTTTATATGTGATGCTGGTTGGCGCTTATCCTTTTGAAGATCCAGAAGAACCAAGAAACTTCAGAAAGACACTTCAGCGTATTCTTAGTGTCCACTATTCTATTCCAGACTATGTTCGCATCACTCAAGAATGCAGACATCTCTTATCTCGAATATTTGTAGCCAACCCTGAAAAGAGAATCACAATACCAGAGATTAAGATGCACCCTTGGTTCCTAAAGAACTTGCCAATAGAATTTATGGAGGAGGGTGTAGGTGGGTTGCAAAATGATGATGTTAATGATGATTCATGTCAGATGATTGAAGAAATATTGTCCATAATTCAAGAGGCCCGGAAGCCAGGTGAGGGCCCAAAAGTTGGTGGGCAGTTTGTTGGTGGAAGCATGGATCTTGATGATATGGATGCAGATGATGCTGACATCGATGACATTGATACAAGCGGTGATTTTGTCTGTGCATTGTGA 1032 0.4167 MEERYEIIKDIGSGNFGVAKLVREKWSGELYAVKFIERGFKIDEHVQREIINHRSLKHPNIVRFKEVLITPTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPGYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPRNFRKTLQRILSVHYSIPDYVRITQECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPIEFMEEGVGGLQNDDVNDDSCQMIEEILSIIQEARKPGEGPKVGGQFVGGSMDLDDMDADDADIDDIDTSGDFVCAL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0749 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Lja4g0749 343 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0749 343 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0749 343 CDD STKc_SnRK2 4 260 - -
Lja4g0749 343 SUPERFAMILY Protein kinase-like (PK-like) 3 267 IPR011009 -
Lja4g0749 343 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0749 343 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Lja4g0749 343 PANTHER SERINE/THREONINE KINASE 3 337 - -
Lja4g0749 343 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Lja4g0749 343 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 3 337 - -
Lja4g0749 343 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0749 Lja-Chr4 6139617 6143619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0749 4 271 CBL-interacting serine-threonine protein kinases AT4G24400 43.682 1.90e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lja4g0749 Pkinase 9.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0749 K14498 - gmx:100807981 619.772