Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0738 ATGGAATTACAGTACTCCTTTCTAGCTATTACTTTACTCCCCTTCTTGTTGCTTTGGCTTGCAAAGCAGAAAATCAAAGTTAGCAGAGCCATGGTTCATAAACAACCCCCGGGGCCATGGAAACTGCCTCTATTAGGGAACTTGCATCAACTGGCAATGGCGGGATCACTTCCACACCATGCTCTTAGAGATTTAGCTCACAAATATGGTCCTCTAATGTACCTTCAACTGGGCGAAATTCATGCAATGGTTGTATCATCCCCTGATATGGCCAAGGAGATAATGAAGACTCATGATCTTGCTTTTGCAAATAGACAACAAACTCTTGCTGCTCAAATTATGTTCTATGGAAATAAAGATATTGTCTTTGCTCCATATGGTGATTACTGGAGACAGATGAGAAAGGTATGTACCTTAGAGCTTTTTAGTGCTAAAAGGGTTCAATCTTTCTCATACGTTCGAGAAGATGAGGTGGCTAAACTCATACAATCCATTCGATTTTCTACACCAAAAGGTTCACCAATCAATTTCAGCAAAAGCGTGTTTTCTTTGTTAAGCGCTTTAGTTTCAAGGACGGTATGGGGTAAAAAATCCAACTATGAAGATGAAATTATGCCTTTGCTCCAGAAAACTATGGAAATGGTTGGAGGTTTTGATGTTGCTGATTTGTTCCCTTCACTAAAACCTCTTCATCTCATAACTCGGAAGAAAGCTAAATTGGAGGGTATGCGTAAGAAGCTGGACAAGATCTTAGAAAATGTTATCAATGATAATCAATCAAACCATGGAAAGGATGAAACTCTCATTGATGTTCTTTTGCGTGTGAAACAAAGTAGCAATCTTGACATACCAATCACTATTGAGAACATCAAAGCCGTTCTATGGGAAATGTTTGGTGCTGGGACTGATAGTTCAGCAACGGTAATAGAGTGGGCTATGTCAGAGCTGATGAAGAACCCAAGAGTGATGGAGAAGACACAAGTTGAAATAAGAAAAGCTTTCAAGGGGAAGAAAATTATTATCGAGACGGATCTACAAGAACTTAGTTACTTCAAGTTGGTGATCAAAGAAACCTTGAGGTTACACCCACCTGTTCCTTTGCTGCTCCCAAGAGAATGTAGGGAAACTAGCATGATTGGTGGGTACGAAATATCTGTTAATACTAAAGTGATAGTAAATGCATGGGCACTTGGAAGAGATCCCAACCTTTGGTATGATGCAGAGAAGTTTATACCCGAGAGGTTTCATGACACGAGTTTTGATTTTAGAGGGAATAACTTTGAGTACCTCCCTTTTGGGGCAGGAAGGAGAATATGTCCTGGAATTTTACTTGGCATAGCCAATGTTGAGCTTTCTTTAGCTGCATTACTCTACCATTTTGACTGGGAACTCCCCAATAGTATGAAACCAGATGACTTGGACATGATTGAACACTTTGGATCTACAGTTGGAAGGAAAAATAGCTTGTATTTGATTCCAACTCCGTATGATTATTCCCTTCATCATGATGTTCATGTCCTCACCTATTGA 1530 0.398 MELQYSFLAITLLPFLLLWLAKQKIKVSRAMVHKQPPGPWKLPLLGNLHQLAMAGSLPHHALRDLAHKYGPLMYLQLGEIHAMVVSSPDMAKEIMKTHDLAFANRQQTLAAQIMFYGNKDIVFAPYGDYWRQMRKVCTLELFSAKRVQSFSYVREDEVAKLIQSIRFSTPKGSPINFSKSVFSLLSALVSRTVWGKKSNYEDEIMPLLQKTMEMVGGFDVADLFPSLKPLHLITRKKAKLEGMRKKLDKILENVINDNQSNHGKDETLIDVLLRVKQSSNLDIPITIENIKAVLWEMFGAGTDSSATVIEWAMSELMKNPRVMEKTQVEIRKAFKGKKIIIETDLQELSYFKLVIKETLRLHPPVPLLLPRECRETSMIGGYEISVNTKVIVNAWALGRDPNLWYDAEKFIPERFHDTSFDFRGNNFEYLPFGAGRRICPGILLGIANVELSLAALLYHFDWELPNSMKPDDLDMIEHFGSTVGRKNSLYLIPTPYDYSLHHDVHVLTY* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0738 509 Gene3D Cytochrome P450 29 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PANTHER CYTOCHROME P450 71B11-RELATED 12 496 - -
Lja4g0738 509 Pfam Cytochrome P450 36 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja4g0738 509 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 SUPERFAMILY Cytochrome P450 36 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0738 509 Coils Coil 233 253 - -
Lja4g0738 509 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 12 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0738 Lja-Chr4 6079003 6080797 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0738 34 496 Cytochrome P450 AT3G48280 44.301 5.91e-136 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0738 - K15472 gmx:100794503 741.495