Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0737 ATGCCAGTAGATATGGAGTTCATATTTGTGCTATTGCTGTTGGGTTGCCTATGTTCTTTTGTGTTGCCTGATGCACAAGGAGATGCTCTATATGCATTGAAGTTATCATTGAATGCTTCAGCTCAGCAGCTCACTGACTGGAATCAAAATCAAGTCAACCCTTGTACTTGGTCACAAGTTTACTGTCACCCGAACACCAACATTGTTTTTCAAGTTTCATTAGAGACGATGGGATTCACAGGATACTTGACCCCAAGAATAGGAGCTCTCAAAGATCTTACAACTCTTTCTTTGCAAGGGAATGGAATCACTGGCGACATACCAAAAGAGTTAGGAAACCTGACAAAATTGATCAGGTTGGATTTAGAAAACAACAGATTAAATGGTGAAATACCACCTTCCCTTGGTAATCTTAAAAAGCTCCAATTCTTGACATTGAGTCAAAACAATCTGAGTGGGACTATTCCTGAATCATTTGGCAGTCTCCCAAGCTTGATCAATGTTCTGCTGGATTCAAATAATCTTATTGGCCAAATTCCAGAGCAGTTATTTCAAGTTCCAAAATACAATTTCACTGGAAATAAGTTGAATTGTGGTAAAAATTATATTCAGCCTTGCGCATCTAATAATGAAGATCAAGGTTCATCACATAAATCGGAAACTGGCCTCATAGTTGGAATTATTATAGGGTTAGTTGCTATCCTTCTCCTTGGTGGTCTACTGCTCTTTTGGTGCAGGGGTAGACACAAGGGCTACAAGCGTGAAGTTTTTGTAGATGTTGCAGGTGAAGTTGATCGGCGAATTGCTTTTGGTCAACTAAAAAGATTTGCATGGAGAGAACTACAGATAGCTACAGACAACTTCAGTGAGAAAAATGTTTTAGGACAGGGAGGCTTTGGAAAGGTTTATAAAGGTGTTCTTGCTGATAACACAAAAGTTGCGGTCAAAAGGTTAACTGATTATGAAAGCCCTGGGGGAGATGCAGCTTTCCAGCGTGAAGTTGAGATGATAAGTGTAGCTGTGCATAGGAACCTGTTACGGCTGATTGGGTTTTGTACTACTCCAACAGAGCGCCTCCTAGTTTATCCCTTCATGCAGAACTTAAGTGTTGCTTATCGTCTCCGAGAAATCAAACCTGGGGAGTCTGTTTTGGATTGGCCTACAAGAAAACGGGTGGCTCTGGGAACAGCCCGTGGCCTAGAGTATCTTCACGAGCATTGCAATCCTAAGATTATTCATCGGGATGTGAAGGCAGCTAATGTATTACTTGATGAAGATTTTGAGGCAGTTGTCGGTGACTTTGGTTTGGCAAAGTTAGTAGATATTCGAAAAACTAATGTAACAACTCAAATTCGCGGGACAATGGGCCACATAGCTCCCGAATATTTGTCCACTGGAAAATCTTCTGGAAGGACTGATGTTTTTGGTTATGGGATTATGCTTTTGGAGATTGTTACAGGTCAACGGGCAATTGACTTTTCCCGCTTGGAAGAGGAAGATGATGTGCTATTGCTTGACCATGTTAAGAAATTAGAGCGGGAGAAAAGACTAGATGCTATTGTTGACCGCAACCTAAATAAAAATTACAACATAGAAGAGGTAGAAATGATGATACAAGTTGCATTACTCTGCACCCAATCGACACCAGAGGACCGTCCAATGATGTCTGAGGTTGTAAGAATGCTCGAAGGGGAAGGGTTGGCTGAAAGGTGGGAGGAATGGCAGCATGTGGAGGTAAATCGGAGGCAAGAATATGAGAGATTGCAAAGAAGATTTGACTGGGGAGAAGATTCGGTTTATAATCAAGATGCCATTGAGTTGTCTGGTGGGAGATGA 1836 0.415 MPVDMEFIFVLLLLGCLCSFVLPDAQGDALYALKLSLNASAQQLTDWNQNQVNPCTWSQVYCHPNTNIVFQVSLETMGFTGYLTPRIGALKDLTTLSLQGNGITGDIPKELGNLTKLIRLDLENNRLNGEIPPSLGNLKKLQFLTLSQNNLSGTIPESFGSLPSLINVLLDSNNLIGQIPEQLFQVPKYNFTGNKLNCGKNYIQPCASNNEDQGSSHKSETGLIVGIIIGLVAILLLGGLLLFWCRGRHKGYKREVFVDVAGEVDRRIAFGQLKRFAWRELQIATDNFSEKNVLGQGGFGKVYKGVLADNTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTPTERLLVYPFMQNLSVAYRLREIKPGESVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDIRKTNVTTQIRGTMGHIAPEYLSTGKSSGRTDVFGYGIMLLEIVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLNKNYNIEEVEMMIQVALLCTQSTPEDRPMMSEVVRMLEGEGLAERWEEWQHVEVNRRQEYERLQRRFDWGEDSVYNQDAIELSGGR* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0737 611 Gene3D Ribonuclease Inhibitor 24 208 IPR032675 -
Lja4g0737 611 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Lja4g0737 611 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 611 - -
Lja4g0737 611 PANTHER LRR RECEPTOR-LIKE KINASE 8 611 - -
Lja4g0737 611 ProSiteProfiles Protein kinase domain profile. 288 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0737 611 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Lja4g0737 611 Pfam Protein kinase domain 289 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0737 611 Gene3D Phosphorylase Kinase; domain 1 257 364 - -
Lja4g0737 611 SUPERFAMILY Protein kinase-like (PK-like) 268 563 IPR011009 -
Lja4g0737 611 SUPERFAMILY L domain-like 26 195 - -
Lja4g0737 611 SMART serkin_6 288 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0737 611 Gene3D Transferase(Phosphotransferase) domain 1 365 582 - -
Lja4g0737 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lja4g0737 611 Pfam Leucine rich repeat 93 151 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0737 Lja-Chr4 6052456 6058927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0737 5 611 Receptor kinase-like Gene Family AT5G10290 76.936 0.0 938
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lja4g0737 Pkinase 1.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0737 - - gmx:100793416 1068.14