Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0693 ATGGCACTCTCACTCTCCTCTTGTTTAACAGTTCCTAATCGTTCTTCTTCTTCTTGTGTTCGGAATTGCAAGGTGAAGAGTAAGGTGGTGTGTTGTTCGGCGCGTGGCGGGAACGATAGGAATCGAATTTGGGGGATTGGGGTTGGGGTTGTGGCGGCTTGTGTGGTGGGTTTAACGGCGTTGGAGGCGGATGCGACGAGGATAGAGTACTACGCCACCGTGGGAGAGCCGTTGTGTGAGCTTAATTACGTGAAGTCTGGCCTCGGTTACTGCGATATTGTTGAGGGTTTCGGTGATGAAGCTCCTCGCGCGGAGCTTATCAATGTTCACTACACTGCAAGATTTGGCGATGGGACAGTGTTTGATAGCACCTATAAACGTGGAAGACCTCTCACCATGCGCATTGGTGTTGGCAAGGTAATCAGGGGACTGGATCAGGGGATTTTTGGGGGAGATGGAGTAACTCCAATGCGAATAGGTGGGAAACGCAAACTGAAGATTCCTCCAATGTTAGCATATGGCCCTGAACCTGCAGGCTGCTTCTCAGGTGATTGTAATATACCGGGCAATGCCACTCTTCTGTATGATATTAATTTTGTTGGAATTTATAACGGCAATGCAAAGTGA 627 0.4896 MALSLSSCLTVPNRSSSSCVRNCKVKSKVVCCSARGGNDRNRIWGIGVGVVAACVVGLTALEADATRIEYYATVGEPLCELNYVKSGLGYCDIVEGFGDEAPRAELINVHYTARFGDGTVFDSTYKRGRPLTMRIGVGKVIRGLDQGIFGGDGVTPMRIGGKRKLKIPPMLAYGPEPAGCFSGDCNIPGNATLLYDINFVGIYNGNAK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0693 208 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 104 203 IPR001179 GO:0003755
Lja4g0693 208 SUPERFAMILY FKBP-like 83 202 - -
Lja4g0693 208 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 13 208 IPR044183 GO:0009507
Lja4g0693 208 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 101 198 IPR001179 GO:0003755
Lja4g0693 208 Gene3D - 78 202 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0693 Lja-Chr4 5708241 5710469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0693 80 200 Calmodulin-binding Proteins AT3G25230 36.585 2.04e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0693 K01802 - gmx:100500547 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0693 4 5708241 5710469 Lja4g0693 4 5708241 5710469 ECH