Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0681 ATGATTTGGATAGCAATTTTCCTGGCTTCTCTTGCTTTCCTGTGGCTATGGAGAAGCAGGCAGAAGGCAGAAACAAAGAGATTACCTCCAGGTCCAAGAGGGTTGCCAATCTTGGGGAGCCTACATAAGCTGAGTGCAAATCCTCATCGTGATCTACACCAACTAGCACAGCAACATGGACCTATCATGTTCTTGCGCTTAGGCTTTGTTCCCACCATTGTTGTTTCTTCACCCCAAGCTGCTGAACTGTTCCTCAAGACCCATGACCTTTCCTTTGCTGGCAGACCACCTCATGAGGCTTCAAAGTACATCTCTTGGGAGCAGAGGAACCTCAGCTTCGGTGAATATGGTCCTTATTGGCGCAACATGCGCAAGATGTGCACGTTAGAATTGCTTAGCCAAACCAAAATTGACTCCTTTGGAGGCATGAGGAGACAGGAGCTTAATCTGCTGATCAAGCTTCTAAGAGAAGCATCCAGTGATGGGGTTGCTGTAGATCTTAGTGCCAAGATTTCAGCACTCACTGCAGACATGAGCTGTAGAATGGTTTTGGGGAAGAAGTACATGGACCAGGACTTGGATGACAAGGGGTTCAAGGGTGTGATGCAAGAGGGCATGCATCTAGCTGCAACTCCTAACATGAGTGACTATATTCCTTACATTGGTGCACTTGACCTTCAAGGGCTAACTAAGCGCATGAAGGCAGTTCACAAAATATTCAATGATTTCTTTGACAAAGTTATTGATGAGCATATGCAATCAGAGAACAGGGAAAACAAGATCAAAAGTTTCGTAGATGTCATGTTGGACTTTGATGGCACTGAAGAATCTGAATACCGGATTGAACGCCCGAATATCAAAGCCATATTGCTGGATATGCTGGCGGGATCAATGGATACTTCTGCTACTGCCATTGAGTGGACAATGTCAGAGCTCCTCAAGAATCCAAGGGTGATGAAGAAAGTCCAAATGGAGTTGGAAACTGTGGTTGGTATGAAGAAGAAGGTGGAGGAATCAGACTTGGAGAACTTGAAGTATTTGGACATGGTTATAAAGGAAAGCCTTAGGCTCCATCCAGTGGCACCATTACTAATACCACATCATGCTGTGGAAGATTGCGTGGTTGGAGAATTCTTCATACCTAAAAACTCCAGGGTCATAGTTAATGCATGGGCAGTTATGAGAGACCCAAGTGCTTGGACTGAGCCAGAGAAGTTCTGGCCTGAGAGGTTTGAGGGAAGCAACATCGATCTCCGAGGGCGTGATTTCCAGCTGATTCCATTTGGTTCAGGCAGAAGGGGTTGTCCTGGATTGCAGTTAGGTCTAACTATGATTCGGTTAGTGGTGGCTCAGCTTGTGCATTGCTTTGATTGGAAGCTACCTAATCACATGTTGCCAACCGATTTGGACATGACTGAGGAGTTCGGACTCACAATGCCTAGGGCAAAACATTTAGTTGCCATTCCTACTTATCGTCTTCAAAATGAAAAAATGTAA 1497 0.4536 MIWIAIFLASLAFLWLWRSRQKAETKRLPPGPRGLPILGSLHKLSANPHRDLHQLAQQHGPIMFLRLGFVPTIVVSSPQAAELFLKTHDLSFAGRPPHEASKYISWEQRNLSFGEYGPYWRNMRKMCTLELLSQTKIDSFGGMRRQELNLLIKLLREASSDGVAVDLSAKISALTADMSCRMVLGKKYMDQDLDDKGFKGVMQEGMHLAATPNMSDYIPYIGALDLQGLTKRMKAVHKIFNDFFDKVIDEHMQSENRENKIKSFVDVMLDFDGTEESEYRIERPNIKAILLDMLAGSMDTSATAIEWTMSELLKNPRVMKKVQMELETVVGMKKKVEESDLENLKYLDMVIKESLRLHPVAPLLIPHHAVEDCVVGEFFIPKNSRVIVNAWAVMRDPSAWTEPEKFWPERFEGSNIDLRGRDFQLIPFGSGRRGCPGLQLGLTMIRLVVAQLVHCFDWKLPNHMLPTDLDMTEEFGLTMPRAKHLVAIPTYRLQNEKM* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0681 498 Pfam Cytochrome P450 29 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 SUPERFAMILY Cytochrome P450 29 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lja4g0681 498 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 Gene3D Cytochrome P450 16 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0681 498 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 1 494 - -
Lja4g0681 498 PANTHER CYTOCHROME P450 93A3-LIKE 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0681 Lja-Chr4 5596814 5598944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0681 2 493 Cytochrome P450 AT5G07990 38.569 7.45e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0681 K20562 - gmx:100809526 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0681 4 5596814 5598944 Lja4g0681 4 5596814 5598944 ECH