Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0665 ATGGGACATGTATACCAAGACAGGCTATCGATTTCTATGGAAGAGTTATGTTCTGAAAATGGTAGCAGCAGGGGAAGGATGGGCAGGAAGAGCTACGACGATGACACCAGAACGTTCAAATCCAAGAACCTCGAGACCGAAAGGAAAAGGAGGGAGAAGCTCAGTTCCAGGCTCTTGATGCTGCGTTCTTTAATGAACAAAGAAACTATTATTGACGATTCGATAACATACATTAAGAAGTTGCAAGATGAGGTTGAGAGCCTCACACGCGAGCTTCCCGGAATTGAAGCAAACTCAAAAGAAGTAGCAAAGCCAAAGGTGGATCAATTTGATGCTGCAGAAGAGATGAAGAAATGGGGGATACAGGAAGAGGTCCAGGTAACAAAAATTGATGGGAATAAATTGTGGGTCAAGATGATCATTGAGAACAAGAGGGGTGGTTTCAAAAATTTGGTGCAGTCTCTGGATACTTATGGCATTGAATTGATAGACACCAATGTCACAGCCATGAAAGGAGCCTTACTGATAACAACCTGCATACAGGGCATGCATGGTGAAACACTTGAAGTTAATCAAACTGAACAGTTCTTGCTTGGTATTCTAAGAACCATTTAG 615 0.4244 MGHVYQDRLSISMEELCSENGSSRGRMGRKSYDDDTRTFKSKNLETERKRREKLSSRLLMLRSLMNKETIIDDSITYIKKLQDEVESLTRELPGIEANSKEVAKPKVDQFDAAEEMKKWGIQEEVQVTKIDGNKLWVKMIIENKRGGFKNLVQSLDTYGIELIDTNVTAMKGALLITTCIQGMHGETLEVNQTEQFLLGILRTI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0665 204 Gene3D - 36 104 IPR036638 GO:0046983
Lja4g0665 204 MobiDBLite consensus disorder prediction 26 48 - -
Lja4g0665 204 PANTHER TRANSCRIPTION FACTOR DYT1 12 203 - -
Lja4g0665 204 SMART finulus 44 87 IPR011598 GO:0046983
Lja4g0665 204 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 94 IPR036638 GO:0046983
Lja4g0665 204 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 12 203 - -
Lja4g0665 204 Coils Coil 71 98 - -
Lja4g0665 204 MobiDBLite consensus disorder prediction 18 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0665 Lja-Chr4 5481236 5482303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0665 22 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 38.776 1.72e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0665 - - lja:Lj2g3v1278950.2 246.128