Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0655 ATGTCAACAACTTCCCCAGCTATTATTAACCACAGCTTATGCGAGGACCAGAATGAGATAATGCCTGCACAAATGGGTTTTGTTCCTTTCCCAATAACAAACATGTCCTTCCCTCCTTTGGATTGCAATCAATCTTTGAAGGCCTTCAGTTCCATAGCTTCTTCACTTGCATCTGAAGGAGACTCTACATCAAATCTAACAGTAGAAACCCTACTTGCAACCACTGCTCTAAAATCAAGATCAGAACATCAATACCTCACTTCTAGCTTTGGAGGACCTCAATTCCTATCCTTGCACAGATCAAGTGTGAATCCATGGGCATTGGGAGAAGTAACTAATGATTGCTTCAGCAATAAAAGAAGTGGAGTAGATGATCATCATCTAAGGATTTCTGCCATGAAGATGAAGAAAATCAAGGGAAGAAGGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACCTTGAGCGAGGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTATGGACAGAAAGTGGTGAAGAACACACAACACCCCAGGAGCTACTACCGTTGCACACAAGACAATTGTCGTGTAAAAAAACGTGTAGAGCGCTTAGCAGAGGATCCAAGGATGGTGATAACAACATATGAAGGGAGACACGCACATTCTCCATCAAATGATCTTGAAGACTCTCAATCTCCATCTGAATTTACCAATTTCTTATGGTAG 714 0.4216 MSTTSPAIINHSLCEDQNEIMPAQMGFVPFPITNMSFPPLDCNQSLKAFSSIASSLASEGDSTSNLTVETLLATTALKSRSEHQYLTSSFGGPQFLSLHRSSVNPWALGEVTNDCFSNKRSGVDDHHLRISAMKMKKIKGRRKVREPRFCFKTLSEVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSNDLEDSQSPSEFTNFLW* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0655 237 MobiDBLite consensus disorder prediction 211 237 - -
Lja4g0655 237 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0655 237 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 228 IPR044810 GO:0003700
Lja4g0655 237 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0655 237 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja4g0655 237 MobiDBLite consensus disorder prediction 222 237 - -
Lja4g0655 237 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 43 228 - -
Lja4g0655 237 SUPERFAMILY WRKY DNA-binding domain 153 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja4g0655 237 Gene3D WRKY domain 147 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0655 Lja-Chr4 5384851 5387323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0655 130 237 WRKY Transcription Factor Family AT4G39410 78.761 1.99e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja4g0655 WRKY 6.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0655 - - gmx:732585 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0655 4 5384851 5387323 Lja4g0655 4 5384851 5387323 ECH