Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0633 ATGAACAAAAACAAGCCCTATCTGGTTGTGTTCATCATACAAGCCATATACGCTGCCATGTTTCTGCTATCAAAAGCTGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTACAGACAGACCGCAGCAACTGTTTTCCTAATCCCTTTCGCTATAGTCTTCGAATGGAATACAGCACCTCCTCTGCCATTCAAGACCTTCTGCAAGATCTTCTTCATTTCTTTCATTGGGATCACTCTTAGCTTGGACATATATGGTGTTGCCCTTACTAAAACTTCTGCAACTTTGGCTGCTGCTACCACAAATTGTCTTCCTGTCATTACCTTCTTCTTGGCTCTCTTGCTCAGGATTGAAGTTTTGAGAATAAAGACAATACCTGGGGTAGCTAAATTGGTTGGTGTTGTGGCATGTTTGGCTGGAGCAGCAACCCTTGCTTTTTATAAAGGACCTCATTTTGAACTTTGGAGCCATCATCACCTTTTGGGGTCCCATAAAACCCAACACCATCAGGGTCTAGTTACATCTAGCTCATGGATAAAGGGGTGTTTCCTCATGCTACTATCCAACACTTGTTGGGGAATGTGGCTTGTGCTACAGAGTTTTGTGATAAAAGGCTACCCTTCAAAGCTGCTTCTGACAGCTCTTCAGTGTTTGTTAAGTTCAATTCAATCTCTGGTCATTGCCTTGGCAGTAGAAAGAGACATTGAGCAATGGAAGTTGGGTTGGAATGTAAGACTCATCGCTGTTCTATATTGTGGAATTTTGGTGACTGGTGTCACATATTACCTACAAACATGGGTTATAGAGAAGAAAGGGCCAGTGTTTCTAGCCATGTCAACACCACTAGCTCTCATCATGACCATCTTTGCCTCAGCAATCCTCTTGGGTGAGATAATAACTCTGGGAAGCATTATAGGTGGCTTGGCTTTGGTTCTAGGACTATACTTTGTGCTGTGGGGAAAGAGCAGAGAGCTAACGGCTAAAGCCTCATTAGATTTAGAACAAGCATCGAGTTAG 1023 0.4291 MNKNKPYLVVFIIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQTAATVFLIPFAIVFEWNTAPPLPFKTFCKIFFISFIGITLSLDIYGVALTKTSATLAAATTNCLPVITFFLALLLRIEVLRIKTIPGVAKLVGVVACLAGAATLAFYKGPHFELWSHHHLLGSHKTQHHQGLVTSSSWIKGCFLMLLSNTCWGMWLVLQSFVIKGYPSKLLLTALQCLLSSIQSLVIALAVERDIEQWKLGWNVRLIAVLYCGILVTGVTYYLQTWVIEKKGPVFLAMSTPLALIMTIFASAILLGEIITLGSIIGGLALVLGLYFVLWGKSRELTAKASLDLEQASS* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0633 340 PANTHER WAT1-RELATED PROTEIN 7 327 - -
Lja4g0633 340 PANTHER WAT1-RELATED PROTEIN 7 327 IPR030184 GO:0016021|GO:0022857
Lja4g0633 340 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Lja4g0633 340 Pfam EamA-like transporter family 5 142 IPR000620 GO:0016020|GO:0016021
Lja4g0633 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Lja4g0633 340 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0633 Lja-Chr4 5206305 5220973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0633 1 254 Nodulin-like Gene Family AT5G64700 59.302 1.34e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0633 - - ccaj:109799350 535.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0633 4 5206305 5220973 Lja4g0633 4 5206305 5220973 ECH
Lja1g4542 1 59320415 59325768 Lja4g0633 4 5206305 5220973 ECH
Lja4g0633 4 5206305 5220973 Lja1g4542 1 59320415 59325768 PCT