Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0593 ATGTCATCGGACAAAAACGCAACGGATGACATAGTGTGCTATTCCCCAAATATGATAACAACAAATGGGATATGGCAAGGAGAAAACCCTTTGCACTATTCTCTCCCTCTTTTCATCTTGCAAGTCATTTTAGTTGTCATTGTCACCCGCATATTCGTCTTCATACTTAGGCCCATCCACCAGCCTCGCGTCATTGCTGAAATCATGGGAGGAATAATATTGGGTCCTTCAGTGCTTGGAAGAAGCAAGAAGTTTGCTGATGCAGTGTTCCCTCTAAGAAGTGTGATGGAAATTGAAACAATGGCAAACGTTGGTCTTCTATATTTCCTCTTCTTGGTGGGTGTGGAGATGGACATATCTGCAATACGGCGCACTGGTAAAAAGGCGGTGACCGTAGCACTTGCCGGCATGGTTGCGCCTTTCGCCCTGGGAGCCATCTTCTCCATCATCTGGATCAGAATTTCTAAGGCAGAAACCAATGAAGTAGCTTTCATGCTGTTTCTTGGGGTCACTCTCTCTGTCACAGCATTTCCTGTGCTTGCAAGGATCCTTGCTGAGCTCAAACTCATCAACACTGAGATGGGGAAGGTTGCTCTCTCAGCTGCACTAGTCAATGATGTGTTTTCTTGGGTACTTTTGGCTCTTGCTGTCACCATTGCTGAGAATAAAAAACCAACCTTGACTTCATGCATGGTTGTGTTGTCATGTTCAGCTTTTGTGGTGTTTAATGTTTTTGCTGTGAGACCTGTAATAATGTGGATAATAAGGAAAACCCCAGAAGGCGAAACTTTCAGTGATTTCTACATTTGTTTGATTCTAGCTGGTGTTATGATCTCAGGTTTCATCACTGATGCTATAGGGACTCATTCTGTTTTTGGAGCTTTTGTGTTTGGTTTGACAATCCCAAATGGGTCACTTGGTCTTGCTCTTGTGGAAAAGCTGGAGGATTTTGTGTCTGGACTTTTGCTCCCTCTCTTTTTTGCCATTAGTGGGTTGAAGACTAATGTAGGACTCATTAAAGGGTTCCTCACCTGGGGAATCATGTTCCTTCTGGTTGTTCTAGCTTGCATTGGCAAAATTGCTGGAACTTTGATTGTTGCAGTCTCTTATCAAATGTCATTTAGTGAAGGAGTTGCACTTGGCTTGCTAATGAACACAAAAGGCCTTGTTGAAATTATCTTGCTTAATATTGGTAGGGATCAGAAGGTTTTGGATGATGGAGCATTTGCAACCATGGTAATTATAACTATACTAATGACTGGAATAATTGTACCTGGTATTTCTGCTATATACAAACCATCAAGGGGGTTCATATCTTATAAAAGAAGAACCATTCAGATGTCAAAAAGAGATTGTGAGTTCAGAGTCCTAGTTTGCATCCACACCCCTAGAAATGTTCCAACAATGATCAACCTTCTTGAAGCCACAAACCCAACAAAGAAGTCCCCTATATGTGTCTATGTCCTCCATTTGGTAGAACTCTCTGGCCGTACATCAGCATTGCTCATTGTCCACAGCTCAGGGAAGCCAGATCACCCTGCCCTTAACAGAACTCAAGCTCAATCTGACCACATAATCAACGCCTTTGAAAACTACGAGCAGCACGCTGATCACATCACTGTCCAGCCCTTAACAGCAGTCTCCCCTTACTCCACTATGCATGAGGATATATGCAACTTGGCGCAGGAAAAGCGTGTCGCCTTCATAATCATCCCTTTTCACAAGCAACAAACGGTAGATGGTGCCATGGAAGCTACCAACATGGTGTTTCGCAGTGTTAACCAAAATGTACTAGCAAATGCACCTTGCTCAGTTGGGATACTAGTAGATAGAGGCTTGAATAGCTCGAACCGTTTGGCGGCAGATCAAGTGTCTCATCAGGTTGCTGTATTGTTCTTTGGAGGGCCAGATGATAGAGAGGCATTGAGCTATGGATGGAGGATGTCTGAACATCCCGGGATAAGCCTTACCGTGATGCGATTCATCCCGGGGGAAGATGTAGTGGAGCCAAAGAGTCATCCTAGCCTCTACCCGGATGAGCCGAGGATACTAACAGTGGAAACAGATAAGGACACAGAGAAGCAACTTGATGACAAGTTAATAAATTGGTTTATGGTGAGTAATGCAAATGATGATTCAATTGATTACATGGAGAAGATGGTGAACAATGGGGAGGAGACAGTGGCAGCAATAAGGTCAATGTATGATATTCATGGACTCTTCATAGTTGGGAGAGGACAAGGGATGATATCACCTCTCACAGCAGGACTCACTGATTGGAGTGAGTGTCCAGAGTTAGGAGCAATTGGGGATTTGTTAGCATCTTCAGATTTTGCAGCAACTGCTTCAGTGTTGGTAGTGCAGCAATACATTGGGGCAGGGTTAGAAGCAGATGGGTCAGTAACACCAGACAATACTATGATGACAAATGAAGAATATGTCAACCAGGTTCACCAACATTCAACACCACCAAGGGGGCATTCTGTGTTCAATACAGATCGCTTGTGA 2508 0.4378 MSSDKNATDDIVCYSPNMITTNGIWQGENPLHYSLPLFILQVILVVIVTRIFVFILRPIHQPRVIAEIMGGIILGPSVLGRSKKFADAVFPLRSVMEIETMANVGLLYFLFLVGVEMDISAIRRTGKKAVTVALAGMVAPFALGAIFSIIWIRISKAETNEVAFMLFLGVTLSVTAFPVLARILAELKLINTEMGKVALSAALVNDVFSWVLLALAVTIAENKKPTLTSCMVVLSCSAFVVFNVFAVRPVIMWIIRKTPEGETFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLTIPNGSLGLALVEKLEDFVSGLLLPLFFAISGLKTNVGLIKGFLTWGIMFLLVVLACIGKIAGTLIVAVSYQMSFSEGVALGLLMNTKGLVEIILLNIGRDQKVLDDGAFATMVIITILMTGIIVPGISAIYKPSRGFISYKRRTIQMSKRDCEFRVLVCIHTPRNVPTMINLLEATNPTKKSPICVYVLHLVELSGRTSALLIVHSSGKPDHPALNRTQAQSDHIINAFENYEQHADHITVQPLTAVSPYSTMHEDICNLAQEKRVAFIIIPFHKQQTVDGAMEATNMVFRSVNQNVLANAPCSVGILVDRGLNSSNRLAADQVSHQVAVLFFGGPDDREALSYGWRMSEHPGISLTVMRFIPGEDVVEPKSHPSLYPDEPRILTVETDKDTEKQLDDKLINWFMVSNANDDSIDYMEKMVNNGEETVAAIRSMYDIHGLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAATASVLVVQQYIGAGLEADGSVTPDNTMMTNEEYVNQVHQHSTPPRGHSVFNTDRL* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0593 835 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja4g0593 835 PANTHER CATION/H + ANTIPORTER 7 825 - -
Lja4g0593 835 PANTHER CATION/H+ EXCHANGER 3 7 825 - -
Lja4g0593 835 Gene3D - 37 435 IPR038770 -
Lja4g0593 835 Gene3D - 475 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0593 Lja-Chr4 4914001 4917750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0593 2 815 Antiporter Super Family AT2G13620 66.871 0.0 1084
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0593 - - adu:107480185 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0593 4 4914001 4917750 Lja4g0593 4 4914001 4917750 ECH