Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0563 ATGAAAAGCCTCTGTCTTGGCCCGTTTCTTGCAGCCAGCACCCCAATTGGAAGCAGAGCTTTTGCATACAATTTGAACAGAAAGTGCTTTCGCAAGCAACTTCAGTTCCACTCCAGCTGTGTTGTTTTATCTTCATTCTCATGTTCTGCAACCGTATCCGTTGCTCCAGAATTAGAATTAGAAGAGAAGAAAACATTTGATGGGGAGAAGGCTGCTTTACTTGTTAGAGAGCTGAGAAAGAGCTTTGATTCAGGCAGGACAAAGAGCTATGAATGGAGGATTTCCCAGTTGGAGGGAATAGCTAAGATGCTAGAGGAGAAGGAGGAGGAAATTATTAAAGCTCTTGATAAGGATCTATCCAAACCTGGATTCGAATCATTTATTACTGAGATTTCCCAGGCAAAATCCTCATGTAGTGAAGCACTTGAAGAACTGAAACACTGGATGAAGCCTGAAAAGGTGAAAACTTCAATCACAACATTTCCATCATCAGCCGAGATTGTATCAGAACCGCTAGGAGTTGTGTTGGTTGTCTCAACATGGAACTTTCCTTTGTTGTTATCATTGGACCCTGTCATTGGAGCCATTTCAGCAGGTAATGCAGTGGTCCTAAAACCATCAGAAATTGCTCCAGCAACGTCATCAGTGCTTGCGGATTTTCTCAAAAGTTATCTTGACAACTCTGCCATAAGAGTTGTAGAAGGAGCTATTCCTGAAACAACTGCACTCCTGGAGCAGAAGTGGGATAAGATACTTTACACAGGCAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCAGCAAAGCATCTTACGCCAGTGGTTCTGGAACTTGGAGGAAAGTGCCCAGCTGTTGTTGATTCAGATGTCAACTTACAAGTTACTGCTAGGAGGATAATAGCTGGAAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACCAAAAAAGAATTTGCTCCTGCGCTGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGGAAAGATCCGATTGAATCAAAAGACATGTCACGTATTGTGTCTCCAGCTCAATTTACACGACTTGCGAAGCTCTTGGATGAGGTATCTGACAAAATTGCTCTAGGAGGTCAGAGTGATGAGAAGAAATTAAAGATTGCTCCAACTATCGTATTGGATGTTCCACAAGAAGCTATGATAATGCAAGAGGAGATATTTGGGCCAATAATGCCGATCATCACTGTGGACAAGATAGAAGATTGCTTCAGTATAATCAAATCAAAGCCAAAGCCTCTCGCTGCATATCTCTTCACAAACAATGAACAGCTGAAGAAGGACTATGTTGAAAAGATATCTTCTGGAGGGATGCTCATCAATGACACTATTATGCATGTTGCAACTCGTGGATTGCCTTTTGGAGGAGTTGAAGAGAGTGGAATGGGTTCTTACCATGGAAAATTCTCTTTTGATAGTTTCAGCCATAAAAAGTCAGTTCTTTATAGAAGTTTTGATGCAGATTCATCCCTTAGGTACCCTCCATATACACCTCAGAAGCAAAAATTGTTGAAGGCCATTATCAGTCGCGACATTTTTGCCATCTTTCTTGCTTTGTTTGGAAGCTCTAAAGAATGA 1632 0.4142 MKSLCLGPFLAASTPIGSRAFAYNLNRKCFRKQLQFHSSCVVLSSFSCSATVSVAPELELEEKKTFDGEKAALLVRELRKSFDSGRTKSYEWRISQLEGIAKMLEEKEEEIIKALDKDLSKPGFESFITEISQAKSSCSEALEELKHWMKPEKVKTSITTFPSSAEIVSEPLGVVLVVSTWNFPLLLSLDPVIGAISAGNAVVLKPSEIAPATSSVLADFLKSYLDNSAIRVVEGAIPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVVLELGGKCPAVVDSDVNLQVTARRIIAGKWACNSGQACISVDYIITKKEFAPALINALKEELEQCFGKDPIESKDMSRIVSPAQFTRLAKLLDEVSDKIALGGQSDEKKLKIAPTIVLDVPQEAMIMQEEIFGPIMPIITVDKIEDCFSIIKSKPKPLAAYLFTNNEQLKKDYVEKISSGGMLINDTIMHVATRGLPFGGVEESGMGSYHGKFSFDSFSHKKSVLYRSFDADSSLRYPPYTPQKQKLLKAIISRDIFAIFLALFGSSKE* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0563 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 79 496 IPR016162 GO:0016491
Lja4g0563 543 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 43 542 - -
Lja4g0563 543 Pfam Aldehyde dehydrogenase family 69 498 IPR015590 GO:0016491
Lja4g0563 543 SUPERFAMILY ALDH-like 74 514 IPR016161 GO:0016491
Lja4g0563 543 PIRSF ALDH 57 539 IPR012394 GO:0006081
Lja4g0563 543 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 280 478 IPR016163 GO:0016620
Lja4g0563 543 Coils Coil 97 117 - -
Lja4g0563 543 PANTHER ALDEHYDE DEHYDROGENASE 43 542 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0563 Lja-Chr4 4688390 4692806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0563 46 543 Aldehyde Dehydrogenase Gene Family AT4G34240 67.000 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0563 K00128 - gmx:100800699 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0563 4 4688390 4692806 Lja4g0563 4 4688390 4692806 ECH
Lja1g4456 1 57969767 57974194 Lja4g0563 4 4688390 4692806 ECH