Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0561 ATGTCTGTGGCTCCAAGCAGTGCCTTGTACCTTTCACATATCAGTGAAAATGGAAACTCTGAGGATGGGAGTTTCCACAAGTTTTTTGAGCTATGGCTGGCTGAGCAGAACCAGCACCTGAAAGATCTTTCAGAAGCTGCTGATGAATCAAGTGGGGTTGTCACAAGTGAGAGGGTTCAGGTACTGGTTGAGAGGGTGGAGGAGCATTATGAGCTCTACTACAAGGCAAAATCAAGGTGGGCAAAGCAAGATGTCTTAGCCATGCTGACCCCATCATGGAGGAGCACCTTGGAGGAGTCTTTTCTCTGGATTGGAGGGTGGAGACCCAGCATGGCATTTCACTTGTTGTATTCAAAATCAAGCTTGCAATTTGAGGCAAGGTTGAATGATCTGATGCAGGGGATGAAAACATGTGACCTTGGAGATCTTTGTGCTGTTCAGCTTTCTGAGCTTGATGACATGCAGAGGAGGACTATTAGGGAGGAGAGGGAGCTCACTGATGTGATGGCAGAGCACCAGGAGACTGTGGCTGATGCTCCAATGGTAGAGCTATCTCATGTGCTCACTGAGATTGTTGGAGGAGGGAATGAAGGTGGTTGTGATAACAAGGAATTGGAAGAGAGGGTTGAGTCTGCTCTGGAGCCAAAGGTGGAGAAGCTGGAAGAGATTCTTCAGAAAGCTGATAATCTGAGGTTGAAGACACTGCAGGGGATTGTTGGCATTCTGACTCCACAGCAGGCTATTCATTTCTTGATTGCTGCTGCTGAGCTGCATCTGAGGTTGCATGAGTGGGGGAAGAAGATGGATGCAAAGAAAGGGAATCATCAAGGCCTTGATTCAACTATTTGA 849 0.4747 MSVAPSSALYLSHISENGNSEDGSFHKFFELWLAEQNQHLKDLSEAADESSGVVTSERVQVLVERVEEHYELYYKAKSRWAKQDVLAMLTPSWRSTLEESFLWIGGWRPSMAFHLLYSKSSLQFEARLNDLMQGMKTCDLGDLCAVQLSELDDMQRRTIREERELTDVMAEHQETVADAPMVELSHVLTEIVGGGNEGGCDNKELEERVESALEPKVEKLEEILQKADNLRLKTLQGIVGILTPQQAIHFLIAAAELHLRLHEWGKKMDAKKGNHQGLDSTI* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0561 282 PANTHER OS01G0159000 PROTEIN 19 276 - -
Lja4g0561 282 PANTHER - 19 276 - -
Lja4g0561 282 ProSiteProfiles DOG1 domain profile. 22 271 IPR025422 GO:0006351|GO:0043565
Lja4g0561 282 Pfam Seed dormancy control 39 118 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0561 Lja-Chr4 4678885 4680285 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0561 14 261 Calmodulin-binding Proteins AT5G65210 27.823 4.70e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0561 - - cam:101504084 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0561 4 4678885 4680285 Lja4g0561 4 4678885 4680285 ECH