Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0553 ATGGCAGAGACGGCGAGAGGGGTTCGGAGGAAAGTTATGGCAATGGGAGTGAAGAGTTGGATGGAAGTTTCGGATTCCGGCGACTCCGGCCTCCAGGACATTGACAAGCACTCGATCATGCGCCGGACTGGATTGCCGGCGCGCGATCTTAGGGTGCTTGATCCAATGCTCTCTCACCCTTCTTCTATTTTAGGGAGAGACAGAGCCATTGTTGTTAACTTGGAACACATCAAAGCCATCATCACTGCCAAACAAGCTCTCATGATCAACTCTTCTAACCCTTTTTTTCTTAGCTTCCTTCAAAATCTTCAAGGCCGCATTCTTTCTTCTACCAATGAAACTCCATCCCAGACTAGCAAAGACATGGATCCTTATTATGAAGGAAAACCTCCCATAGATGAGTCAGCATTGTTGAGCAGCCGTAATGATTCCCTGAACATTCCATTACAAGGGGTATTTGAGGATTCTGATACCTTCCAAGACATGCAAAAGATTGATGTAAAATGGAGTAAGGCTAAGACTGCAGAGGCTGGAAAATCAGTAGCATCAGCTCCAAAGCAACTACCTTTTGAGTTCAGAGCACTTGAGGCATGTATTGAATCTGCTTGCACGTGTCTTGAATTTGAGACTCGAACATTGGAGGAAGAAGCTTACCCAGCTTTGGATGAGTTGACCTCTCAAATTAGCTCACTCAATCTTGATCGAGTAAGACAGATAAAAAATCGTCTGGTTGCACTTTCTGGTCGTGTGCAGAAGGTAGCAGATCAAATTGAACAATTGTTGGATGATGATAATGACATGGAAGAAATGTACTTGACACAAAAGCTTGATGCTCGTCAGCCATCATCAAAGGAAGACAATAGGTCACTTGAAGATGATGATGAAAGTGATGATAGCAATTCCGCTAAAGACAAATATTATGGTTCTAAGCCAAATGTCGAGGAATTAGAGATGCTTCTTGAGGCTTATTTTGCACAGATAAATGGAGTCTCACAAAAATTATCCAGTTTGAGTGAGTACGTAGATGATACAGAGGACTATATCAACATAAACTTGGATGATAAGAGAAATCAACTTCTGCAGGTAGCAGTAATATTTAATACATTAAGCATGATAATTAATGCTGGTATTGTGGTTGTAGGATTGTTTGGCATGAATATTCACATTGAACTCTTTGATGGTCAACCTCATCAATTTTGGTCAGCAACATTTGGTACATCTGGAGGTTGTATACTATTATTCCTTATTTCTGTTTGGTGGGGTAAGAAAAGATATTTGCTCTCTCAATAG 1290 0.4124 MAETARGVRRKVMAMGVKSWMEVSDSGDSGLQDIDKHSIMRRTGLPARDLRVLDPMLSHPSSILGRDRAIVVNLEHIKAIITAKQALMINSSNPFFLSFLQNLQGRILSSTNETPSQTSKDMDPYYEGKPPIDESALLSSRNDSLNIPLQGVFEDSDTFQDMQKIDVKWSKAKTAEAGKSVASAPKQLPFEFRALEACIESACTCLEFETRTLEEEAYPALDELTSQISSLNLDRVRQIKNRLVALSGRVQKVADQIEQLLDDDNDMEEMYLTQKLDARQPSSKEDNRSLEDDDESDDSNSAKDKYYGSKPNVEELEMLLEAYFAQINGVSQKLSSLSEYVDDTEDYININLDDKRNQLLQVAVIFNTLSMIINAGIVVVGLFGMNIHIELFDGQPHQFWSATFGTSGGCILLFLISVWWGKKRYLLSQ* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0553 429 Gene3D - 10 92 - -
Lja4g0553 429 CDD Mrs2_Mfm1p-like 20 424 IPR039204 -
Lja4g0553 429 MobiDBLite consensus disorder prediction 273 289 - -
Lja4g0553 429 PANTHER MAGNESIUM TRANSPORTER MRS2-F 5 427 - -
Lja4g0553 429 Pfam CorA-like Mg2+ transporter protein 315 422 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lja4g0553 429 MobiDBLite consensus disorder prediction 273 307 - -
Lja4g0553 429 Gene3D Magnesium transport protein CorA, transmembrane region 156 359 - -
Lja4g0553 429 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 5 427 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0553 Lja-Chr4 4567248 4570306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0553 19 427 MRS2 Gene Family AT3G19640 44.902 3.82e-117 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0553 - K16075 gmx:100808805 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0553 4 4567248 4570306 Lja4g0553 4 4567248 4570306 ECH