Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0551 ATGAAGGTTAAGAAGGGATGGCTAGCAGTTCAAGTGGGTTTGGAGGAAGAAGATCAGTGTTCTCCTCAAAGGTTGGAGATTCCAATTTGGTATCTTTATCATTCTCTTTTCAATTGTCTTTTGGACAGAGCTCGTGAGGTTTATGGCTACCACACCGAGGGACCCCTCAAGCTGCCATGTTCCCTTGATGACTTTCTTCATCTCCGCTGGCAAATTGAGAAAGAGTCCTCCAATTCCCATCACAACAACCACCATCAATTACTTCCTCACGCCTTGAATTTCCACTCTTGTTGA 294 0.4456 MKVKKGWLAVQVGLEEEDQCSPQRLEIPIWYLYHSLFNCLLDRAREVYGYHTEGPLKLPCSLDDFLHLRWQIEKESSNSHHNNHHQLLPHALNFHSC* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0551 97 PANTHER SMALL AUXIN-UP RNA-RELATED 1 86 - -
Lja4g0551 97 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 86 IPR003676 GO:0009733
Lja4g0551 97 Pfam Auxin responsive protein 3 70 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0551 Lja-Chr4 4539295 4539838 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0551 3 93 Calmodulin-binding Proteins AT5G20810 38.384 1.17e-11 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0551 - K14488 gmx:100809305 141.354