Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0491 ATGCTAGCTAGCCATAGTTGCCCTCACTCAAACTACATACATAGCACACCTGCCATCTTTTCTTTGGTTATATATTTATCAACAATCCCCATTTTCATGGATTCATCACCTCCCTCTCTAACATTCAAAGTGCAGAGGTGCAAACCAGAGTTGGTACCTCCTGCTTCATCCACTCCCCACGAAGTGAAACTGCTATCTGACATTGACGACCAAGATGGTTTGCGTTTCAATATTCCATTCATTATGATGTACCGTCACGAACCATCAATGGCAGACAAAGACCCTGTTCAAGCCATTCGACAAGCGCTCTCACGAACACTTGTGTATTACTATCCCTTTGCCGGTAGGCTCAAGGAAGGTCCTGGCCGGAAACTCATGGTGGATTGTACTGGCGAGGGTGTGATGTTCATTGAGGCTAATGCAGATGTGAGTCTTGTTGAGTTTGGGGAAACACCTTTGCCTCCATTCCCCTGCTTTGAAGAGCTTCTGTATGATGTTCCAGGCTCAGAACAAGTTCTTGATAGCCCCCTTCTACTCATACAGGTCACACGCCTCAAGTGTGGTGGTTTTATCATGGCCCTCCGCTTTAACCATACCATGAGCGATGGAGCTGGCTTAAAGCAATTCTTGAGTGCCCTGGCAGAAATGGCTCAGGGTGCTTCCCAACCTTTAACTCCACCAGTGTGGTGCAGAGAGCTTCTGATGGCAAGAGATCCACCACGCATCACATGCAACCACTATGAATTTGAGCAAGTACCGTCAGATTCCACTGAGGAAGGGGCCATCACGCGGTCTTTCTTCTTTGGTTCCAATGAGATAGCAGCACTTCGTCGCTTAGTTCCCTTAGACCTTCGTCATTGCAGCACATTTGATGTCATTACTGCATGCTTCTGGTATTGTCGCACGAAAGCGTTGCAACTGGCACCACATGACGATATTCGTCTAATGACCATTGTCAACACACGTAACAGGTTCAACCCTCCGATACCTGTTGGTTATTACGGCAATTGTTTTACATATCCGGCGGTTGTCACCACAGTCGGGAAGCTTTGTGGAAACTCATTTGGCTATGCTGTGGAATTAGTAAGGAAAGCAAAAGCCCAGGCCACCGAAGAGTACATGCATTCTATGGCAGATTTTTTGGTGGCTAACCGGCGATGTTTATTTACAACAGTAAGGTCTTGTATTGTATCAGATTTGACACGATTTAAGCTCCATGAAACAGACTTTGGGTGGGGCGAGCCAGTGTGTGGCGGAGTGGCCAAAGGTGGGGCAGGGCTTTATGGTGGAGCATCATATATTATAGCTTGTAAGAATGCAAAAGGGGAAGACGGTAGAGTTTTGGTAATTTGCTTGCCTGTCGAGAATATGAAGAGGTTTGCAAAAGAGTTGAATAACATGATTGTGTGA 1410 0.4638 MLASHSCPHSNYIHSTPAIFSLVIYLSTIPIFMDSSPPSLTFKVQRCKPELVPPASSTPHEVKLLSDIDDQDGLRFNIPFIMMYRHEPSMADKDPVQAIRQALSRTLVYYYPFAGRLKEGPGRKLMVDCTGEGVMFIEANADVSLVEFGETPLPPFPCFEELLYDVPGSEQVLDSPLLLIQVTRLKCGGFIMALRFNHTMSDGAGLKQFLSALAEMAQGASQPLTPPVWCRELLMARDPPRITCNHYEFEQVPSDSTEEGAITRSFFFGSNEIAALRRLVPLDLRHCSTFDVITACFWYCRTKALQLAPHDDIRLMTIVNTRNRFNPPIPVGYYGNCFTYPAVVTTVGKLCGNSFGYAVELVRKAKAQATEEYMHSMADFLVANRRCLFTTVRSCIVSDLTRFKLHETDFGWGEPVCGGVAKGGAGLYGGASYIIACKNAKGEDGRVLVICLPVENMKRFAKELNNMIV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0491 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 42 466 - -
Lja4g0491 469 Gene3D - 42 247 IPR023213 -
Lja4g0491 469 SUPERFAMILY CoA-dependent acyltransferases 128 226 - -
Lja4g0491 469 SUPERFAMILY CoA-dependent acyltransferases 267 380 - -
Lja4g0491 469 PANTHER ALCOHOL ACYLTRANSFERASE 42 466 - -
Lja4g0491 469 Pfam Transferase family 43 465 - -
Lja4g0491 469 Gene3D - 248 464 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0491 Lja-Chr4 4016417 4024904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0491 43 464 Monolignol Biosynthesis Gene Families AT5G48930 28.182 1.86e-46 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0491 K19861 - gmx:100792864 585.489