Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0470 ATGGTTCTCAAGACAGAGCTTTGCCGATTCAGCGGTGCCAAGATCTACCCTGGTAGAGGCATCAGATTCATTCGCAGTGATTCTCAGGTGTTTCTGTTTGTCAACTCGAAATGCAAACACTACTTCCACAACCGCTTGAAGCCTTCCAAGCTCACCTGGACCGCCATGTACAGGAAGCAGCACAAGAAGGATATTGCTCAAGAAGCTGTGAAGAAGAGGCGTCGTGCTACCAAGAAGCCTTACTCTAGGTCCATTGTTGGTGCTACTCTGGAAGTTATCCAGAAGAAAAGAACTGAGAAGCCTGAGGTTCGAGATGCAGCTAGGGAAGCTGCTCTTCGTGAAATTAAGGAGAGAATCAAGAAAACCAAGGATGAGAAGAAGGCCAAGAAAGCTGAAACAACTGCTAAGTCACAAAAATCTCAAGGAAAAGGCAATGTCTCCAAGGGTGCTGCACCGAAAGGTCCCAAACTTGGTGGTGGAGGCGGGAAACGTTAA 495 0.4747 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKHYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIKKTKDEKKAKKAETTAKSQKSQGKGNVSKGAAPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0470 164 Coils Coil 112 136 - -
Lja4g0470 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Lja4g0470 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 - -
Lja4g0470 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Lja4g0470 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Lja4g0470 164 SMART 4TRASH 8 46 IPR011017 -
Lja4g0470 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Lja4g0470 164 MobiDBLite consensus disorder prediction 115 164 - -
Lja4g0470 164 Gene3D - 69 141 - -
Lja4g0470 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Lja4g0470 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Lja4g0470 164 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0470 Lja-Chr4 3841769 3843863 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0470 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 87.261 8.07e-90 257