Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0468 ATGGAGTTTGTGAAGAAGTGTAAGAGGGGGTATCGGGGAAACAACGAGAGATTGCACCCTGAAGACACTACTGGCAGCTACGAAAAATTATCAGATCACAATAAAAACAAGGAAAACGATCTTAAGAAGAAGAAGAAGAAAGTTCCACATGGTTGTGTTAGTGTGTATGTTGGAGCTGAGAGACAAAGATTCGTGATTAAGATAAAGATGGCCAACCACCCCTTGTTCAGGACGCTTTTAGAGGCTGCTGAGAATGAATATGGATACAGAAACGATGGCCCTCTATGGCTCCCTTGCGATGTTGATTTGTTCTGTGAGACACTGGCGGAGATGGAGAGAGAGCACTGA 348 0.4397 MEFVKKCKRGYRGNNERLHPEDTTGSYEKLSDHNKNKENDLKKKKKKVPHGCVSVYVGAERQRFVIKIKMANHPLFRTLLEAAENEYGYRNDGPLWLPCDVDLFCETLAEMEREH* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0468 115 PANTHER SMALL AUXIN-UP RNA-RELATED 1 113 - -
Lja4g0468 115 Coils Coil 27 47 - -
Lja4g0468 115 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 113 IPR003676 GO:0009733
Lja4g0468 115 MobiDBLite consensus disorder prediction 1 39 - -
Lja4g0468 115 Pfam Auxin responsive protein 35 108 IPR003676 GO:0009733
Lja4g0468 115 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0468 Lja-Chr4 3816196 3816771 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0468 48 113 Calmodulin-binding Proteins AT4G34750 51.515 1.69e-18 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0468 K14488 - cam:101489648 143.665