Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0421 ATGTCTGGATGCAATAAATCACCTAAAAATGATCAACATTCGATCAAATATAGGTGGATTCGACATGGGAGAGCATCCTTTGATTCTGATCTTTCGTGCTCAGATTATTCGCCTTCTCTTTCCAGTAATGAGAATAAGAAATGCTACACAAGTTCTCAAGTGAAGTCCCCTGAGATACTGAGCACTTCTCAGCTCATCTCTGCGATAGGTCAGATATGGGATTCTGCGGGTCGCCCACTTTCTTTTGTGCTCCCAGAGGAAGATGTGAATCGAGATGGTAAAGGATTTCCAATAGAGAAAATTCTGGGTAAAACAGATGAGAAAAGGACTGATGTGGTTACTTCAAATAACTCTAGTTACTATCCTGTTAATACGGGGGCTATTAGTGGTTTTAGTTCTAGGATTGTACAGGAAAAATTGGATTTCCCTAAGGTGACAAAAAAGATGATAGTACTTGAATCTTCTAATGAAAGTCAAGATTATATTTATTCGTTATTCCAAAGAGTTTTGCTGACCAGTAATAAAAATTCAAATGAATATTGTAAAGACATGGAACTTGGGAATGAAGAAATCCCATTTAGATCAGGTAATGTACATTGGTGGATGAGTAGGTATGCTCCTAAGGGGCTAAATTGCCATGTGGAGGTTAGTAAACCTGAGAACCTGGAAACTGATTCTCCTGTTGCTCAGGCCTGTATTTCAACGGATACTAGCACCCCTGTATTGGCTAATGAAAGTGATGAATGCAGTCCTGATTTGATCATACATGAAGCTCGACAATCATCTAATGATGCAATTCTGAGCACAGGAGTAGTTAGCTCTCTGTGTTCAGACTATTTTCTTCAAGCCACCCCTGATACTAAGACAGATGTTGGTGCTTGTCAGACACAATCTTCTAGTATCTATACGGACTATCATATCAACTCTTTAGCTTCCTGTAGTAGTGCCTCTGTGCGGAACCGACACAAGATCGATGATAGTGAATTACTGGAAAACCAAAGAAAAAATTTATTCGATATAACTGATGATAAACATATGGTTCAAAACTTCTCTGCAACCCATCAGAAGCCTTTTAATTCCCTAGCCAAGCAAGAACATGCTTTTTCTGGGGCATTAGCTGGAATATGTGTCAGCCTTTGTCTGCATCCGGTTGACACAATTAAGACAGTCACTCAATCATGCCGTGCAGAGCAGAGGTCCATCTTTTACATTGGCAAATCAATTGTTTCTGATAGAGGTTTGCCTGCACTATATCGTGGAATTACTACAAACATTGCATGCTCAGCTCCGATTTCCGCAGTTTATACTTACACCTATGAATCAGTTAAATCAGCTTTTCTTCATTTTCTTCCAAAGGATTATTCTTCTTTTGCCCATTGTGCGGGAGGTGGTGTTGCAAGCATTGCTACCTCTTTCATTTTTACTCCCAGTGAGCGTATAAAGCAACAAATGCAAGTTAGGTCTCATTATGGCAACTGCTGGGATGTCTTGGCTGGTATTATTCGAAAGGGTGGTTTTTCCTCCCTATATGCGGGTTGGGGAGCTGTTCTGTGCCGCAATGTTCCGCATTCCATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTCATGCCATCTTTTTCATCTAGTATTCAGTCCAGCTCATTACAGACTTTAGTGTGTGGAGGATTAGCCGGATCTACTGCTGCTTTATTCACAACTCCTTTTGATGTGATCAAGACTAGATTACAAACACAGATTCCAGGAACCACAAATCAATATGACAGTGTGCTCCATGCCCTTTATAAAATCAGCAAGAATGAAGGTTTGAAAGGCCTATACAGGGGGTTGACTCCAAGGTTGATTATGTACATGTCTCAAGGATCCCTGTTCTTTGGTTCATATGAATTTTTCAAGAGGCTATTTTCTCTGGACAAGAATGTTGAGGACAGAAAAAATATAGAACTAACAAAAAGTGTGTCATGA 1968 0.3984 MSGCNKSPKNDQHSIKYRWIRHGRASFDSDLSCSDYSPSLSSNENKKCYTSSQVKSPEILSTSQLISAIGQIWDSAGRPLSFVLPEEDVNRDGKGFPIEKILGKTDEKRTDVVTSNNSSYYPVNTGAISGFSSRIVQEKLDFPKVTKKMIVLESSNESQDYIYSLFQRVLLTSNKNSNEYCKDMELGNEEIPFRSGNVHWWMSRYAPKGLNCHVEVSKPENLETDSPVAQACISTDTSTPVLANESDECSPDLIIHEARQSSNDAILSTGVVSSLCSDYFLQATPDTKTDVGACQTQSSSIYTDYHINSLASCSSASVRNRHKIDDSELLENQRKNLFDITDDKHMVQNFSATHQKPFNSLAKQEHAFSGALAGICVSLCLHPVDTIKTVTQSCRAEQRSIFYIGKSIVSDRGLPALYRGITTNIACSAPISAVYTYTYESVKSAFLHFLPKDYSSFAHCAGGGVASIATSFIFTPSERIKQQMQVRSHYGNCWDVLAGIIRKGGFSSLYAGWGAVLCRNVPHSIIKFYTYESLKQVMPSFSSSIQSSSLQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGTTNQYDSVLHALYKISKNEGLKGLYRGLTPRLIMYMSQGSLFFGSYEFFKRLFSLDKNVEDRKNIELTKSVS* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0421 655 SUPERFAMILY Mitochondrial carrier 364 632 IPR023395 -
Lja4g0421 655 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 648 - -
Lja4g0421 655 Gene3D Mitochondrial carrier domain 343 461 IPR023395 -
Lja4g0421 655 ProSiteProfiles Solute carrier (Solcar) repeat profile. 547 635 IPR018108 -
Lja4g0421 655 Gene3D Mitochondrial carrier domain 463 653 IPR023395 -
Lja4g0421 655 ProSiteProfiles Solute carrier (Solcar) repeat profile. 454 537 IPR018108 -
Lja4g0421 655 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 648 - -
Lja4g0421 655 Pfam Mitochondrial carrier protein 453 538 IPR018108 -
Lja4g0421 655 Pfam Mitochondrial carrier protein 365 447 IPR018108 -
Lja4g0421 655 Pfam Mitochondrial carrier protein 548 637 IPR018108 -
Lja4g0421 655 ProSiteProfiles Solute carrier (Solcar) repeat profile. 361 445 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0421 Lja-Chr4 3432289 3436392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0421 359 643 Chloroplast and Mitochondria Gene Families AT1G07030 32.653 2.73e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0421 - - lja:Lj4g3v2962350.1 1098.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0421 4 3432289 3436392 Lja4g0421 4 3432289 3436392 ECH