Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0420 ATGCAGTGGGAACGGGAGGGAGGGGGGAAAGGGGGAACTGAAAGCATAAATGGGTTTCCTCGGGGAGGTGTCAACCGAAGAGAAGGCACACTTGAAGGTGGCTGGCTCGTATCCGTGGTGAAGTGGTTCAATGCTGTGCTTCCTGACTTTAATCTTCCTTTAGAAACTTCAGCGGAGGAATTTAGGGCATGCTTGAGAGATGGGTCTGTGTTGTGCAGCATTTTGGAAATTTGGTTTCCTGGTGCATCAGAGGAAAGTAGCTATTGGAATGAGCCAGTTGGTGTTAAAAGGTTTCTGATGGCTTTGGATGAATTGGAATTACCGGGATTTGAATTGTCAGACCTGGAGCAGGGATCCATGGTGCCTGTGTTGCAGTGCCTTGAAACTCTAAGAACTCATTTTGATTATAATGATGTGCGAGAAAATATCCAAAGTTCTAGAAAGAGGTGGGACCAGTCAAATCCGACATCCCTAGAGGAAACTCATAATTTCCTCAAAGATGGTTCAAATTATCAACACACTGTGCATGGTTCTGCTGTATCAGATGGAATTGCTTCCGCAGATTCTATTGGATTAAAGTCTAATGAACTGTTCCAGTTGAAGCAAGGATTGCACATGGATCTTTCAGATGCTAAACTTGATGAATTATTAAAATCAAACAATTTGGATAATGTCTCAACTAAAGTGCTTTTTAACATAGGAAATAAGATCCTAAGTGATATCTTTGAAAGAAAGAATGGAGAAGTACCTCAAGCTCAGCGTGCAACATGGCTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGTTTTTCAAATCAAGCAGAAGGCATGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGGAAGTACCAAACAAAACTAAATGCGCTTGAAGCCCTGGCAGCAGGGGCAACTGAAGAGAATGAGGTCGTTACAAGTTGGGTTCAGCAGTTGAAGTTTACTATGCAGCTTGAACAAACTAAATTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTAAAGAAAGACAAAGTTCGTAATGAAATTGAAATTTCTGCATTGAAGCAAGATTTGGATATGGCCAAAAGAACATATGAAGAACACGTTTCACAGTTAGAATTACAAGCTGCTGAATCTAAAGCTGAATATGAGAAAAGGATAGTGGAACTTAAGCACCAGCTTGCTGATGCAAGGAAGCAAGTCAAGGATCTGGAGGCCTTTTCAGAATCTAGATCTCTGAATTGGAAGCATAAAGAGCATACCTATCAAAGTTTTGTAAATTATCAATCTAAAGCTTTCAAGGAATTGAGAGGTGCCTTGAAGTTTGTCAAAAATGAAGTGATAAAAACGAAAAGAGGCTACTTAGAGGAATTCAAGTACTTTGGGATGAAGCTCAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTCGTTCTAACCGAAAATAGGAAGCTGTACAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAGTCAGACCATTTCTTTCGGGGCAAAGTCAAAATCATACAACAATTGAGTTTGTTGGAGATGATGGAGAACTAGTTGTTAGCAATCCTCTTAAACAGGGAAAAGAAAGTCGCAGGCTTTTTAAATTTAATAAGGTTTTCGGTCAAGCAGCTAGTCAAGAGGAAATATTCTTGGACACTCAACCACTTATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACATATACGATGAGTGGACCTAGCCTATTATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAAAGTAGAAGAAGCTCTATTGTTTATGAAGTTGAAGTTCAAATGGTTGAAATTTATAATGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCTCAAAAGAGACTTGGGATTTGGAATACTACCCAGCCAAATGGGTTGGCTGTTCCTGACGCAAGTATGCATTCTGTGAATTCAATGACAGATGTCCTCGAGTTGATGAATATTGGTTCGATGAATCGGGCAACTAGTGCCACAGCCTTAAATGAAAGAAGTAGCAGATCACACAGTGTTCTCTCTATTCATGTTCGAGGAACGGAATTGAAGACCAATACGCTGTTGCGTGGGTGTCTACATCTTGTAGATCTTGCGGGAAGTGAAAGAGTGGATCGCTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAGCATATAAATAAATCACTATCTGCTCTTGGAGATGTGATATTTGCTCTAGCACAAAAGACTCCACATGTTCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCAAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCCTATTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTAGGTGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGCATCTCTCAAGGATGCAAATGCAAGGAAGGATGAAGAGATTGAGCGGTTGCAATTTCTCAAGGCTGATCACAATGGTGCAAAGCTTGGAATTGTCTCACCAAGGCATGGGTCATCATCTCCAAGGAGACATTCCATAGGGACTCCCCGACTTGGCACTAGACTTTCAGGAGCAAGGAGCTTTAGAGCCAGTGAAAAAGCAGCTTCTGACATGGATAACTGCTCAGAGTATAGTGACAAGAATTCAGAAGCTGGCTCTCATCAGTCAATGGATGATTTCAGGAACAAACCCAGTTCCCTACGGTTGAAATTAGCTAGTGAAGATACCAGTCAAAATTTGAATGAGGACATTGAACTCTTAAAATTTGGAGATGCGGATTCGGAGGAGAGATTAAGTGACATATCGGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAGTACACTCTTTTCCCTGAACTCGAGAAGGCAGCTGAAACTACACCAGATAAGGGCAGAACAGCTGACAACCTTCCACCTGAGAGCACAGAAAAGCCTGTTATGCCATCCAGAATTCCGAAAGCTCCGCCACTCCAGCCAAAACTGCAGACAAGAACTTCTACTTCTAGGCTATCATTGAACAGAAGCTCATCAAAGGTTTTGTCAAGTGTTAGGAAACCCACAGTTGGTAGCTCTTCGTCGGTGAAGCCTTCCAATTCCAAACGTTGGCAATAG 3279 0.4142 MQWEREGGGKGGTESINGFPRGGVNRREGTLEGGWLVSVVKWFNAVLPDFNLPLETSAEEFRACLRDGSVLCSILEIWFPGASEESSYWNEPVGVKRFLMALDELELPGFELSDLEQGSMVPVLQCLETLRTHFDYNDVRENIQSSRKRWDQSNPTSLEETHNFLKDGSNYQHTVHGSAVSDGIASADSIGLKSNELFQLKQGLHMDLSDAKLDELLKSNNLDNVSTKVLFNIGNKILSDIFERKNGEVPQAQRATWLLRKILQVIELRFSNQAEGMKNQNNLFKAREGKYQTKLNALEALAAGATEENEVVTSWVQQLKFTMQLEQTKFEEKKKLEEQDFSRLKKDKVRNEIEISALKQDLDMAKRTYEEHVSQLELQAAESKAEYEKRIVELKHQLADARKQVKDLEAFSESRSLNWKHKEHTYQSFVNYQSKAFKELRGALKFVKNEVIKTKRGYLEEFKYFGMKLKGLAEAAENYHVVLTENRKLYNEVQDLKGNIRVYCRVRPFLSGQSQNHTTIEFVGDDGELVVSNPLKQGKESRRLFKFNKVFGQAASQEEIFLDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLLSKSDWGVNYRALHDLFHISQSRRSSIVYEVEVQMVEIYNEQVRDLLSSNGPQKRLGIWNTTQPNGLAVPDASMHSVNSMTDVLELMNIGSMNRATSATALNERSSRSHSVLSIHVRGTELKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKTPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLASLKDANARKDEEIERLQFLKADHNGAKLGIVSPRHGSSSPRRHSIGTPRLGTRLSGARSFRASEKAASDMDNCSEYSDKNSEAGSHQSMDDFRNKPSSLRLKLASEDTSQNLNEDIELLKFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKAAETTPDKGRTADNLPPESTEKPVMPSRIPKAPPLQPKLQTRTSTSRLSLNRSSSKVLSSVRKPTVGSSSSVKPSNSKRWQ* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0420 1092 ProSiteProfiles Kinesin motor domain profile. 499 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 PRINTS Kinesin heavy chain signature 777 798 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 PRINTS Kinesin heavy chain signature 728 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 PRINTS Kinesin heavy chain signature 574 595 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 PRINTS Kinesin heavy chain signature 697 714 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 Gene3D - 36 135 IPR036872 -
Lja4g0420 1092 MobiDBLite consensus disorder prediction 1048 1092 - -
Lja4g0420 1092 MobiDBLite consensus disorder prediction 1 23 - -
Lja4g0420 1092 Pfam Kinesin motor domain 505 825 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 SMART kinesin_4 497 835 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0420 1092 Coils Coil 355 411 - -
Lja4g0420 1092 Gene3D Kinesin motor domain 442 829 IPR036961 -
Lja4g0420 1092 ProSiteProfiles Calponin homology (CH) domain profile. 33 135 IPR001715 GO:0005515
Lja4g0420 1092 MobiDBLite consensus disorder prediction 1010 1092 - -
Lja4g0420 1092 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1092 - -
Lja4g0420 1092 SUPERFAMILY Calponin-homology domain, CH-domain 38 133 IPR036872 -
Lja4g0420 1092 MobiDBLite consensus disorder prediction 876 943 - -
Lja4g0420 1092 Coils Coil 841 871 - -
Lja4g0420 1092 PANTHER KINESIN-LIKE PROTEIN KLP-3 1 1092 - -
Lja4g0420 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 499 865 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0420 Lja-Chr4 3422280 3430364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0420 467 860 Calmodulin-binding Proteins AT5G65930 39.089 7.72e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0420 K10406 - gmx:100777089 1685.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0420 4 3422280 3430364 Lja4g0420 4 3422280 3430364 ECH