Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0410 ATGGATGCATCAACAGCTTTAATGATCCTATCAACAATTGCAGCCTATTTAATATGGTTCTCCTTGATGACTCGACCACTTAGAGGTCCACGTGTATGGCCTCTATTGGGTAGCCTTCCGGGTCTAATCCAGCACGCCAACCGCATGCACGACTGGATCGCAGAAAATCTACGTGCGTGCGGCGGCACGTACCAGACCTGCATCTCCGCCATCCCCTTCGTGGCAAGGAAACAGGGTCTCGTGACCGTCACGTGCGACCCCAAGAACCTCGAGCACATCCTCAAGCTCCGATTTGATAACTACCCCAAGGGCCCCACATGGCAAGCAGTTTTCCATGACTTGCTTGGAGAGGGTATCTTCAACTCAGACGGTGACACGTGGCTATTCCAGCGCAAGACCGCAGCGCTGGAATTCACCACGCGCACCCTTCGGCAAGCCATGGCGCGGTGGGTGAACCGCGCCATCAAGCACCGGTTCTGCCCCATCTTAGCCGCAGCACAGGAGCGGAAAACCGTTGTGGATCTCCAAGACCTCTTGCTCCGCCTCACCTTCGACAACATTTGCGGCTTGGCTTTCGGTCAGGACCCAGAGACGCTCGCCGCAGATCTCCCGGAGAATGGTTTCGCTCTCTCTTTCGACAACGCCACCGAAGCCACGTTGCAACGGTTTATTCTGCCAGAGATCGTCTGGAAGCTGAAGAAGTGGCTCGGCTTGGGAATGGAGTCGAGCCTTAATCGGAGCTTAAAGCAAATCGACCAGTATCTCTCTGACATCATCCAGAAACGGAAACTCGAATTGATTAACAAGAGTGGTGGGGCCCTCCACGATGATCTCCTTTCACGATTCATGAAGAAAAAAGATTCCTACTCAGACGAGTTCCTCCAACACGTGGCCCTTAACTTCATCCTCGCTGGGAGGGACACGTCATCAGTGGCGCTCAGTTGGTTCTTCTGGCTTTGCATCAAGAACCCCAGGGTGGAGGAGGAAATCCTCATCGAGCTCTGCACCGTTCTGATTGAGACACGTGGCACTGACGTGTCAAAATGGACCGAGGAGCCACTCGCTTTTGAGGAGGTTGACCGGTTGGTGTACCTCAAAGCTGCACTGTCAGAGACACTGCGACTCTACCCCTCCGTGCCGGAAGACTCCAAGCACGCGGTGAACGACGACGTTTTGCCGAGCGGGGAATTCGTGCCGGCAGGATCAGCGGTGACATACTCGATTTACTCCGTCGGGAGGATGAAGTTCATTTGGGGCGAGGACTGCCTGGAGTTCAGGCCCGAGCGGTGGCTCTCTGCCGAAGGGGACAAGATTCAGATGCAGGACAATTACAAGTTTGTTTCGTTCAACGCGGGCCCCAGGATCTGCTTGGGGAAGGACCTGGCCTACCTGCAGATGAAGTCCATCGCGGCGGCGGTGTTGCTTCGCCACCGCCTCACGGTGGCGCTGGGGCATCGCGTGGAGCAGAAGATGTCGCTGACGCTATTCATGAAGTATGGGCTGAAGGTGAATGTGCACACTAGGGATCTCGCGACTGTGCTTGAAAAGATAACAAACAAAGGTGAATCGTACGGTCAATGA 1581 0.5497 MDASTALMILSTIAAYLIWFSLMTRPLRGPRVWPLLGSLPGLIQHANRMHDWIAENLRACGGTYQTCISAIPFVARKQGLVTVTCDPKNLEHILKLRFDNYPKGPTWQAVFHDLLGEGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVNRAIKHRFCPILAAAQERKTVVDLQDLLLRLTFDNICGLAFGQDPETLAADLPENGFALSFDNATEATLQRFILPEIVWKLKKWLGLGMESSLNRSLKQIDQYLSDIIQKRKLELINKSGGALHDDLLSRFMKKKDSYSDEFLQHVALNFILAGRDTSSVALSWFFWLCIKNPRVEEEILIELCTVLIETRGTDVSKWTEEPLAFEEVDRLVYLKAALSETLRLYPSVPEDSKHAVNDDVLPSGEFVPAGSAVTYSIYSVGRMKFIWGEDCLEFRPERWLSAEGDKIQMQDNYKFVSFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTVALGHRVEQKMSLTLFMKYGLKVNVHTRDLATVLEKITNKGESYGQ* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0410 526 Pfam Cytochrome P450 28 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PANTHER CYTOCHROME P450 86A7 3 510 - -
Lja4g0410 526 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 Gene3D Cytochrome P450 23 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Lja4g0410 526 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PANTHER CYTOCHROME P450 3 510 - -
Lja4g0410 526 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0410 526 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0410 Lja-Chr4 3315807 3318343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0410 1 520 Cytochrome P450 AT4G00360 74.570 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0410 K15398 - gmx:100792719 918.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0410 4 3315807 3318343 Lja4g0410 4 3315807 3318343 ECH