Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0393 ATGATCATTTCGGAGAAGAACCGTAAAGAGATCTGCAAGTACCTCTTTCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTACAACTTGGCGAAGCACCCAGACATTGATGTGCCGAATCTGCAGGTGATTAAGCTCATGCAGAGCTTCAAGTCTAAGGAGTATGTCAGGGAAACCTTTGCTTGGATGCACTATTACTGGTTCCTCACCAATGATGGCATTGAGTTTCTCAGAACCTATTTGAATCTCCCATCTGAAATTGTGCCTGCTACCTTGAAGAAACAGGCTAAGCCACCTGGTAGACCATTCGGTGGTCCACAGGGTGATCGCCCTAGGGGTCCACCACGCTTTGAAGGAGAACGTAGGTTCGGTGGTGACCGTGATGGGTACCGTGGAGGTCCCCGAGGTGGTGACCTTGGAGGTGACAAGGGAGGAGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTCCTGGTGGAAGGCCTGGCTTTGGCCGTGGATCAGGTGGCTTTGGAGCACCAACCAGCTCAAATGATGCTTAA 537 0.5102 MIISEKNRKEICKYLFQEGVCFAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPQGDRPRGPPRFEGERRFGGDRDGYRGGPRGGDLGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0393 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Lja4g0393 178 MobiDBLite consensus disorder prediction 112 132 - -
Lja4g0393 178 MobiDBLite consensus disorder prediction 91 178 - -
Lja4g0393 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
Lja4g0393 178 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 176 - -
Lja4g0393 178 Gene3D - 1 104 IPR036388 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0393 1 153 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.117 4.11e-76 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0393 K02947 K09422 gmx:100500445 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0393 4 3144218 3146127 Lja4g0393 4 3144218 3146127 ECH