Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja4g0384 | ATGATGAATGAGCTTGCTTGCTTAATGGATTGGGATTTGGAAGCAATTGTCAGAGGATGCAACAACGGTGAAGCCTCAGCAACCACCATGATGGACCATCAGGATCATAACTTTTCTCATCATTTCTTCTCTGAACAAGATGAGCTTCTTGGCTTTAATTTTCCTGAATTCTCAGAAGCAACGTGTGTCCTTGATGAATTGGAAGAGCTTTACAAACCTTTCTACCCAGTTTTGCACCCTCTGAATTCATTACAGAGTACCATAGTCACAAGTTCCCTACCTATCCCAAAAGAAGTCAAAGAACTTAAAGCATCATCATCAGAGAAAGCAGCTTCACAAGATTTGCAAGTTCCCTCAGTATCTAAATATAAAAGAGGCAAGAAAAACCAGAACAAGAGTGTGGTGAAGAAACAAGTGAAGGGAGGTGATGGTCTTGCTGATGAGTGGGCTTGGCGTAAATATGGACAGAAACCAATAAAGGGTTCCCCTTATCCTCGAAGCTACTACAGGTGCAGCAGCACCAAAGGATGCTTGGCAAGGAAACAAGTTGAAAGGAGCCATTTGGATCCTGCAGTTTTTCTAGTTACCTACACAGCAGAACACAATCATTCCCAACCAGCAAGGAAAAACTCATTAGCAGGAACCACAAGGAATAAGAACATTTCCCAAAACACATGTTCCTCAAATTCCTCATCATCAGCAGTAACTCACTCTCCAATAAGGACACCCAATTTGGTTGTTGTGGCCTCATCCAACATTAAAGATGAGGTTGGGACAAGAGTGCAACAAAGTGATAAGGGTTTGGAGAAAGAGGAAGATTTTCTTGAGTGGTTAGATGGTGATGCTGGAGGTGCTACATTTGGTGATGGTTGGATCCCAAGCTCAGAGCTTGAGGATCTCATAGGATTTAAGTACCAAGAACTTGTAGATGGCTGTGATTTCACTGATGGTTCTGATGATCGATGA | 966 | 0.4224 | MMNELACLMDWDLEAIVRGCNNGEASATTMMDHQDHNFSHHFFSEQDELLGFNFPEFSEATCVLDELEELYKPFYPVLHPLNSLQSTIVTSSLPIPKEVKELKASSSEKAASQDLQVPSVSKYKRGKKNQNKSVVKKQVKGGDGLADEWAWRKYGQKPIKGSPYPRSYYRCSSTKGCLARKQVERSHLDPAVFLVTYTAEHNHSQPARKNSLAGTTRNKNISQNTCSSNSSSSAVTHSPIRTPNLVVVASSNIKDEVGTRVQQSDKGLEKEEDFLEWLDGDAGGATFGDGWIPSSELEDLIGFKYQELVDGCDFTDGSDDR* | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja4g0384 | 321 | SMART | WRKY_cls | 145 | 205 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g0384 | 321 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 10 | 262 | IPR044810 | GO:0003700 | |
Lja4g0384 | 321 | Gene3D | WRKY domain | 129 | 207 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g0384 | 321 | PANTHER | WRKY TRANSCRIPTION FACTOR 63-RELATED | 10 | 262 | - | - | |
Lja4g0384 | 321 | ProSiteProfiles | WRKY domain profile. | 140 | 206 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g0384 | 321 | Pfam | WRKY DNA -binding domain | 147 | 203 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g0384 | 321 | SUPERFAMILY | WRKY DNA-binding domain | 145 | 206 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lja4g0384 | 321 | MobiDBLite | consensus disorder prediction | 203 | 238 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja4g0384 | Lja-Chr4 | 3088280 | 3090114 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja4g0384 | 2 | 253 | WRKY Transcription Factor Family | AT4G23550 | 45.113 | 1.40e-54 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lja4g0384 | WRKY | 3.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lja4g0384 | K13426 | - | gmx:102663255 | 301.597 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lja4g0384 | 4 | 3088280 | 3090114 | Lja4g0384 | 4 | 3088280 | 3090114 | ECH | |
Lja4g0384 | 4 | 3088280 | 3090114 | Lja5g0674 | 5 | 6073274 | 6074802 | ECH | |
Lja4g0384 | 4 | 3088280 | 3090114 | Lja3g1845 | 3 | 20906793 | 20908656 | ECH | |
Lja4g0384 | 4 | 3088280 | 3090114 | Lja1g3051 | 1 | 36914094 | 36915753 | ECH |