Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0372 ATGAGCTCCGTCGATGCGAATAGAGAACAACGAGGTTCATCATCAACCATGGTGGAGAAATCTCAGTCTAAGGCACTTCTGTTTCTGGCATACCAGAGTTTGGGATTTCTGTTTGGTGACCTGACCCTCTCCCCTCTTTATGTCTATCAAAGTATATTTTCTGGAAGACTCAAACATGATCAAAATGAGGATGCGATATTCGGTGCATTTTCGTTGATATTTTGGACTCTTTCCCTTTTTTCTTTGTTCAAGTATGCAGTTTTCATGTTGAGTACAGATGATAATGGTGAAGGGGGAATTGTTGCTCTATATTCACAGCTTTGCAGAAATGCGAAATTTTGTTTGCTTCCCAATCTTCAAGCATCGGATGAGGAGCTTTCTACATATCACAAAAATGGTTGCTCAAATAGAAATATACCACCCTCACCCTTGAAAAGATTCATTGAGAAACATAAGAGTACAAAAATAGCTTTGCTTATTTTAGTTTTACTGGGTGCTTGCATGGCAATTTGTGTTGGTGCTATCATGCCTGCCATTTCAGTGCTTTCATCGGTTGAAGGGCTGAAAATTGAAGCGAAGATTACAAACAATAGTATGGTGCCTCTTATTTCTTGTGTTCTACTGGTTGGGCTCTTTGTACTGCAACACCGTGGCTCCCACAAGGTTGCCTTCATGTTCCCTCCCATAATCATCCTATGGTTACTGTCTATTTTCATGATTGGCATTTACAATGTCGTCAAGTGGAATCCAAGAATATATCAGGCTCTTTCTCCATATTACATATACAAGTTCTTTCGGGTTACAGGAAAAAAAGGTTGGATTAATCTTGGAGGAGTATTTCTATGTGCTACAGGCACTGAAGCTATGTTTCAAGACCTTGGGTACTACAGACGAGCACCTGTAAGGGTTACATTTTTTTCTATCATTTATCCATGTCTAATTCTTCAATACATGGGGCATGCTGCTTTTCTTTCGAAGAATTTATCTGCACTACCTATAAGCTTTTATGCTTCTATTCCAGATATCCTATTTTGGCCTGTATTCGTGGTGGCTGCTTTAGCAGCAATAGTTGCAAGTCAGGGCGTCATCTCTTCAACATTCTCAATTGTTCAACAATGCCATGCATTTGAATGTTTCCCTCGTGTTAAAGCAGTTCATTCCAGAAGGTGGATCCCTGGCCAGACATACATACCAGAGATAAACTGGATTCTTATGATAATCTGCCTGGCTGTGACAATTGGTTTTGGGGACCCAATCCATATAGGATATGCGTATGGAATTGCGAGTCTGTTTGTGGTATTTGTGACCACATGGTTGACGTCACTGGTCCTCAGTCTTGTATGGAATCAAAGTCTATTAGTTTCTCTGGCATTTGTTTTAATTTTTGGTTCGATCGAGGTTATCTTCCTTTCATCCTATTGCATGAAAATCCCGAAAGGTGGCTGGGTTCCGCTTGTGCTCTCTGCGGTCTTCATTTTTGTTATGTATGGGTGGCAATATGGTTCTAGAAAAAAGTATTTATTCGATATGCATAACAAAGTTTCAATGAAATCAATCCTTACATTGGGTCCTAGTCTTGGGATTGTTAGGGTTCCTGGAATGGGCCTTATCTATACTGAATTAGCTTCTGGAGTCCCTGCCAGTTTTACTCATTTCTTGACAAATCTGCCAGCTTTCTATCAAGTGGTTGTTTTTGTTTGTGTTAAGACTGTCCCCGTGCCTTCTGTACCCCATGAGGAACGTTACATCATTGGCCGAATTGGTCCCAAATCTTTCCGATTATATCGGTGCATTGTCCGAAATGGCTACAAAGATGTTTATAGCCATGAAAATGATTTTGAAAATGACCTGGTGATGAGCATAGCAGAATTCATTCAACTGGAAGCTGAAGGTAGTTATGGAAGCCTAGATGGCGCTGTAGATGGCCGGATGGCAGTGGTTAGGACGTCTGGGAAGTTTGGTACAAGATTGCTAAAGACAGAATCTTCTAGCTTTGAAGAAGGCTGCAGTAATAGCCTTCCTGGGACTTTGACTGTTACTAACAGTAAATCTCCAACGTTGATGAAGCTGCAGGCGATGTATGAGCAGGAATCACCTGAACTCAACAATAGACGAAGGATTCGATTTGAGGTGCTAAATACAATCTATAAAGATCCACGTGTCAAGGAAGAGCTCATGGAACTTGTGGAAGCCAAGCGTGCTGGAGCAGCGTATGTAATAGGTCATTCTCACGTAAAGGCTAAGTGGAACTCTTCATTTGTTAAGAAGTTTGCTATCAACATGTACTCTTTTCTCCGAAAAAATTGTCGGTCCCCTGCTGTAGGACTAAACATTCCTCAGATTTGTCTGATTAAGGTAGGGATGAATTATCATGTCTAG 2379 0.409 MSSVDANREQRGSSSTMVEKSQSKALLFLAYQSLGFLFGDLTLSPLYVYQSIFSGRLKHDQNEDAIFGAFSLIFWTLSLFSLFKYAVFMLSTDDNGEGGIVALYSQLCRNAKFCLLPNLQASDEELSTYHKNGCSNRNIPPSPLKRFIEKHKSTKIALLILVLLGACMAICVGAIMPAISVLSSVEGLKIEAKITNNSMVPLISCVLLVGLFVLQHRGSHKVAFMFPPIIILWLLSIFMIGIYNVVKWNPRIYQALSPYYIYKFFRVTGKKGWINLGGVFLCATGTEAMFQDLGYYRRAPVRVTFFSIIYPCLILQYMGHAAFLSKNLSALPISFYASIPDILFWPVFVVAALAAIVASQGVISSTFSIVQQCHAFECFPRVKAVHSRRWIPGQTYIPEINWILMIICLAVTIGFGDPIHIGYAYGIASLFVVFVTTWLTSLVLSLVWNQSLLVSLAFVLIFGSIEVIFLSSYCMKIPKGGWVPLVLSAVFIFVMYGWQYGSRKKYLFDMHNKVSMKSILTLGPSLGIVRVPGMGLIYTELASGVPASFTHFLTNLPAFYQVVVFVCVKTVPVPSVPHEERYIIGRIGPKSFRLYRCIVRNGYKDVYSHENDFENDLVMSIAEFIQLEAEGSYGSLDGAVDGRMAVVRTSGKFGTRLLKTESSSFEEGCSNSLPGTLTVTNSKSPTLMKLQAMYEQESPELNNRRRIRFEVLNTIYKDPRVKEELMELVEAKRAGAAYVIGHSHVKAKWNSSFVKKFAINMYSFLRKNCRSPAVGLNIPQICLIKVGMNYHV* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0372 792 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 19 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g0372 792 Pfam K+ potassium transporter 31 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g0372 792 PANTHER POTASSIUM TRANSPORTER 3 19 792 - -
Lja4g0372 792 TIGRFAM kup: potassium uptake protein 29 792 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0372 Lja-Chr4 2972205 2977887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0372 19 792 Inorganic Solute Cotransporters AT4G23640 62.113 0.0 995
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0372 K03549 - gmx:100777998 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0372 4 2972205 2977887 Lja4g0372 4 2972205 2977887 ECH