Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0360 ATGGAGTTTCAATTTCTAAGCATTTTCTGTTGCATTTCCTTGTTGGGTTTGTTTATGCTACAAGGATATGCTGAACCTGTTGAAGATAAGGAGGCTTTGCTTGATTTTGTGAACAAGTTTCCTCCTTCTAGGCCTCTGAATTGGAATGGAAGCTTCTCCATGTGTGCTTCTTGGACTGGTGTGACTTGCAATGAAGATAAGTCTAGAGTAATAGCTATTAGATTGCCAGGGGTTGGTTTTCATGGTAGCATCCCTGCTAACACCATTAGCCGCCTCTCAGGGCTTCAAACTTTGAGCCTTAGATCCAATGTGATAACTGGGCAGTTTCCTTCTGATTTCTCCAATCTCAAAAACTTGTCTTTTCTCTACCTCCAGTTCAACAAATTGTCTGGTCCTTTACCTGATTTCTCAGCTTGGAAGAACCTTACTGTTGTTAATTTGTCCAATAATCACTTCAATGGCACCATTCCTGTTTCCATTTCTAATTTGACTCAGCTTGCTGGTTTGAATCTTGCAAACAACTCTCTTTCTGGTGAAATTCCTGGTCTACAGTCCTCCAGATTGCAGCTGCTGAATTTGTCCAACAACCACTTGCAGGGTAGTGTGCCTAAATCGCTTATGAGGTTTCCTGAGTCTGCGTTCTTCGGAAATAACATCTCTCTTGGAAATTCCTCTGCGGTTTCGGTGCCACCTCTGCCAGATAATGAGCCATCTTCAACATCTAAGAAAGGTGGAAGGCTTAAGGAGGCTGCACTGCTAGGAATTATTGTTGCTTGTAGTGTTCTAGTCCTTGTGGCATTTGTTCTTTTGTGGTTTGTGTGCTGCTCTAGAAGAAAGGGGGATGAAGATGAAGCCTTCAGTGGGAAGTTGCGCAAGGGAGGAATGTCTCCGGAGAAAACAGTCTCAAGGGACCAGGATGCAAATAATAAAATGGTTTTCTTTGAGGGATGTAGTTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTACTAGGAAAAGGAACATTCGGTACTGCATACAAGGCGATACTAGAGGACGCAACGATGGTTGTTGTGAAGAGGTTAAAGGAGGTAGCTGTTGGAAAGAAGGATTTTGAGCAGCACATGGATGTTGTAGGAAGTCTTAAGCATGAGAATGTGGCTGAGCTGAAGGCATATTATTATTCCAAAGATGAGAAACTGATGGTTTATGATTACTACAGTCAGGGGAGTGTCTCTTCTATGTTGCATGGTAAAAGAGGAGAGGAGCGGGTGCCTTTAAATTGGGATACTCGTTTGAAAATAGCTCTAGGTGCTGCCAGAGGCATTGCTCGCATCCATGTTGAGAATAGTGGGAAGCTTGTGCATGGCAACATCAAGTCTTCAAACATCTTTGTCAATACTAAACAGTACGGTTGTGTATCTGACCTTGGCCTGGCAACCATGTCGAGCTCGCTTCCCCTGCCAATCTCACGAGCTGCCGGTTACCGTGCACCGGAAGTTACAGACACGAGGAAAGCAGCCCAGCCTTCAGACGTCTACAGCTTCGGTGTGGTGTTACTGGAGCTTCTGACTGGGAAATCACCTATCCACACAACTGGTGGCGATGAGATGATCCACCTTGTGAGGTGGGTTCATTCCGTTGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGATTTGGAGCTAATGAGATATCCAAACATAGAAGAAGAGATGGTGGAAATGTTGCAAATAGCCATGTCATGTGTGGTAAGGATGCCTGATCAGAGGCCTAAAATGTCTGAAGTTGTGAAGATGATAGAAAACGTGAGGCAGAATGACACAAAGACTCAGCAATCATCTGAGAACCAAGCAACACCTAAAATATCTCAACGCGACTATGATAACTCGCCTTCTACTCCATCATCCCCCTTACCAAAAGGAAGTGAATGA 1920 0.4437 MEFQFLSIFCCISLLGLFMLQGYAEPVEDKEALLDFVNKFPPSRPLNWNGSFSMCASWTGVTCNEDKSRVIAIRLPGVGFHGSIPANTISRLSGLQTLSLRSNVITGQFPSDFSNLKNLSFLYLQFNKLSGPLPDFSAWKNLTVVNLSNNHFNGTIPVSISNLTQLAGLNLANNSLSGEIPGLQSSRLQLLNLSNNHLQGSVPKSLMRFPESAFFGNNISLGNSSAVSVPPLPDNEPSSTSKKGGRLKEAALLGIIVACSVLVLVAFVLLWFVCCSRRKGDEDEAFSGKLRKGGMSPEKTVSRDQDANNKMVFFEGCSYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATMVVVKRLKEVAVGKKDFEQHMDVVGSLKHENVAELKAYYYSKDEKLMVYDYYSQGSVSSMLHGKRGEERVPLNWDTRLKIALGAARGIARIHVENSGKLVHGNIKSSNIFVNTKQYGCVSDLGLATMSSSLPLPISRAAGYRAPEVTDTRKAAQPSDVYSFGVVLLELLTGKSPIHTTGGDEMIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMPDQRPKMSEVVKMIENVRQNDTKTQQSSENQATPKISQRDYDNSPSTPSSPLPKGSE* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0360 639 PANTHER OS05G0588300 PROTEIN 23 610 - -
Lja4g0360 639 Gene3D Phosphorylase Kinase; domain 1 295 402 - -
Lja4g0360 639 Pfam Leucine rich repeat 83 129 IPR001611 GO:0005515
Lja4g0360 639 Gene3D Ribonuclease Inhibitor 138 229 IPR032675 -
Lja4g0360 639 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0360 639 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0360 639 SUPERFAMILY L domain-like 39 208 - -
Lja4g0360 639 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Lja4g0360 639 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Lja4g0360 639 MobiDBLite consensus disorder prediction 599 639 - -
Lja4g0360 639 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Lja4g0360 639 Gene3D Ribonuclease Inhibitor 28 137 IPR032675 -
Lja4g0360 639 SUPERFAMILY Protein kinase-like (PK-like) 332 597 IPR011009 -
Lja4g0360 639 PANTHER PROTEIN, PUTATIVE-RELATED 23 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0360 Lja-Chr4 2857784 2861629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0360 24 633 Receptor kinase-like Gene Family AT4G23740 63.651 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lja4g0360 Pkinase 3.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0360 - - gmx:100804799 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0360 4 2857784 2861629 Lja4g0360 4 2857784 2861629 ECH