Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0358 ATGGCCGAGAAAATGCACCTTAGTTTCTTCATCTTTGCCATGATTGGCTTCATTACATTGGTGCCTGTGAGTTCAAAAATTCACATTATTGGAGACCAAACGGGTTGGAGTTTGCCCAATTACTCAACTTTTTACGGTACCTGGGCCAAGAAGCAAAATTTTGCTGTTGGTGACGAACTCCGTTTTAAGTACAGGCCCGGGCTGAACACTGTGTTACAAGTAAACAAGGATGACTACGATCATTGCACTACCAGAAAAACCATAAGCACGTTCTTCAGAGGAGACACCATCATTTCTTTGGACAAGCCCGGTGACTATTTCTTCATAAATTCCGTGGGCAAACATTGCGAGGGAGGCCAAAAGATCGCAATTACTGTTCCTCAGGGAAAGCCCAGCTCCCATTAA 405 0.442 MAEKMHLSFFIFAMIGFITLVPVSSKIHIIGDQTGWSLPNYSTFYGTWAKKQNFAVGDELRFKYRPGLNTVLQVNKDDYDHCTTRKTISTFFRGDTIISLDKPGDYFFINSVGKHCEGGQKIAITVPQGKPSSH* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0358 134 SUPERFAMILY Cupredoxins 25 127 IPR008972 -
Lja4g0358 134 Pfam Plastocyanin-like domain 40 120 IPR003245 GO:0009055
Lja4g0358 134 ProSiteProfiles Phytocyanin domain profile. 26 128 IPR003245 GO:0009055
Lja4g0358 134 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 2 127 - -
Lja4g0358 134 PANTHER BLUE COPPER PROTEIN 2 127 IPR039391 GO:0009055
Lja4g0358 134 Gene3D - 26 134 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0358 Lja-Chr4 2846382 2847006 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0358 11 126 Phytocyanin Superfamily AT2G25060 33.333 9.04e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0358 - - gmx:102660389 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0358 4 2846382 2847006 Lja4g0358 4 2846382 2847006 ECH