LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja4g0303	ATGGCACTCCACACACGCAAACTGCACCTCCTTCTAACATGTCTATTTCTGTTCTTCTCACCACTAACACCACTCACCACCGTTACAGCCATGGTTGCCGCTGCTGTTCTTCCCGTCAAGCCTTCAACCCCTCTCGTTTCCTTCCTCGAACGCCTCCAACACACCGCCTTCGAATCCTTCGCCGGCGGCGGCGACAACGACGGCGAACCTTCCCACTTCGACCCGAAGACTTACGTCGATTTGCCTCTCAAGTTCAGCCTCGCTGTCACCGATGACGCGTTCCAGAACCTTCCACGGGCGGCGAATGGGTCAATCCCGGCCCGTGAGTTGAAGAGTTTTCTAGAAGGCTATTTTGAGGATGCAGGGGATGATCTGGTGCACGTTGATCCAGAGGATTTTGTTCCTGAGCCTGAGGGTTTCTTGCCGAAGGTGAAGAACCTTGAGGTGAGAGCGTGGGCGATTCAGGTTCATTCGTTGTGGAAGAATCTGACCCGGAAGGTGTCTGGTTCGGTTGTGGCTGAACCGGAGTTGCATACTCTGCTTCCTCTGCCGGCTTCTGCTGTGGTTCCCGGTTCAAGGTTTCGTGAGGTTTATTACTGGGATTCCTATTGGGTGATCAGGGGTTTGTTGGTGAGTAAAATGTACAAGACTGCTACTGATATTGTCATGAATCTCATTCACATGATAGAGGAATATGGGTTCGTGCTTAATGGTGCTAGAGCTTACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCTATGATTTATGAGATATACTGTAGCACTGGCAACATAGAATTAGTCAAAAGGTCTCTCCCTGCGCTACTGAAAGAGCATGAGTTTTGGAATTCAGATATACATAAAGTGACCATTTTGGATGCTCAAGGTTGCACTCACAACCTAAATCGTTATAATGCAATGTGGAACAAACCCAGGCCAGAATCATCCATACAAGACAAGACATCTGCTTCCAAGTTCTCAAAAATTTCAGAAAAACAACATTTTTACCGTCAACTGGCATCAGCTGCTGAATCAGGATGGGACTTCAGCACAAGATGGATGAGAGATCCTCCTGATTTCACAACATTGTCTACAACATCAGTAATACCTGTTGATTTAAATGCATTTCTACTTGGGATGGAGCATAATATTGCTTTCTTTGCAAAAGTTACTGGAGATAATAGTACTGCTGAACACTTTCTGCAAATTTCTGATCTTAGAAAGAAGTCAATGAACTCTGTTTTCTGGAACTCAAACATGACTCAATGGCTTGATTACTGGCTCAGTGATAGCACATCTGAGGAGATTCAAGTTTTGAAAACCACGCAGCAGAATGAAAATGCATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGGTATTCTTAATTGA	1407	0.4563	MALHTRKLHLLLTCLFLFFSPLTPLTTVTAMVAAAVLPVKPSTPLVSFLERLQHTAFESFAGGGDNDGEPSHFDPKTYVDLPLKFSLAVTDDAFQNLPRAANGSIPARELKSFLEGYFEDAGDDLVHVDPEDFVPEPEGFLPKVKNLEVRAWAIQVHSLWKNLTRKVSGSVVAEPELHTLLPLPASAVVPGSRFREVYYWDSYWVIRGLLVSKMYKTATDIVMNLIHMIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYCSTGNIELVKRSLPALLKEHEFWNSDIHKVTILDAQGCTHNLNRYNAMWNKPRPESSIQDKTSASKFSKISEKQHFYRQLASAAESGWDFSTRWMRDPPDFTTLSTTSVIPVDLNAFLLGMEHNIAFFAKVTGDNSTAEHFLQISDLRKKSMNSVFWNSNMTQWLDYWLSDSTSEEIQVLKTTQQNENAFASNFVPLWMKPFYSGILN*	469

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja4g0303	468	PANTHER	TREHALASE	39	463	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	Pfam	Trehalase	73	463	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	PRINTS	Glycosyl hydrolase family 37 signature	302	319	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	PRINTS	Glycosyl hydrolase family 37 signature	369	386	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	PRINTS	Glycosyl hydrolase family 37 signature	232	250	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	PRINTS	Glycosyl hydrolase family 37 signature	412	428	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	PRINTS	Glycosyl hydrolase family 37 signature	337	354	IPR001661	GO:0004555\|GO:0005991
	Lja4g0303	468	SUPERFAMILY	Six-hairpin glycosidases	71	460	IPR008928	GO:0005975
	Lja4g0303	468	PANTHER	TREHALASE	39	463	-	-
	Lja4g0303	468	Gene3D	-	70	463	IPR012341	GO:0005975

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lja4g0303	38	464	Trehalose Biosynthesis Gene Families	AT4G24040	55.581	2.06e-171	494

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja4g0303	K01194		-	gmx:547539	684.1

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja4g0303	4	2451173	2456262	Lja4g0303	4	2451173	2456262	ECH

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