Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0291 ATGTCAAGGGCCATAGACAAGAAGCTTGGTGCAGGACGTGTGGTGGCTGTAGCCATTGAGAACAACAAAACAAGCCAATATGCCGTCAAATGGGCTGTTGACAATATTCTTCCCAAGGAACAACATCTCTTATTAGTCCATGTTAGACAAAGAGCTTCTTCCATTCCTACACCAACTGGAAACAATATATCCCTTGATGGCAATGATGATGTGGCTAGAGCATACAAGCAACAAATGGACAATGAATCCAGGGAGCTTTTTGCTTCATTCCGTGTCTTCTGCAATAGAAAGAGTATACTATGCAAAGAAGTGTTGTTGGATGACACAGATATAGCTAAGGCAATAATTGAAGGCATTTCATCCTATTCCATAGAGCTTCTGATACTTGGGGCCCCATCAAGGAGTGGTCTTGTAAGAAGATTTAGGACATCGGATGTTCCAGGTGTCGTGTCAAGAGGGGCACCGCCATTCTGCACTGTGTACATTATTTCCAAAGGAAAGATCTCATCAGTGAAAACTGCTACTTCTGCACTACCTGCTAAACCTACACCAAAATTGCAGCCTCAGCCTGTCCTGAGTAATGAGAAAATGGAGGCACAGCTAATTCGCAGCCATCCACCACGACCATCAGCTGAGAAGCCAGCATACCTTTCTCGCCAGATTCAGGATGAAGATGAAATGAGGTCACCTTTCACAAGAGTTGGAAAACCAGGCCACAGATCCTACGAGTCCTCAATCCCTGACTCTGACATTTCATTCGTGAGCAGTGGAAGGCCAAGTATTGATAGGATGTTCCCTATGGTATACGATGAAATGGACTCAACCCCTCGGTTTTCGTCAGGATCAGATAATGATGTTAGAAGTTTCGGTTCATCTTTCTCAGGTGCTAAGTCAATTGATCAGGGTGACTACTCATTCTGCTCACAAGACAGTGGGACATCAATGTCGTCAGCACCAAGGTTTTCAAGTGGGGATGATGTGGAAGCTGAAATGAGGAGACTGAGGTTAGAACTGAAGCAAACAATGGAAATGTACAGCACAGCTTGCAAAGAAGCTCTGACAGCAAATCAAAAGGCATTGGAACTTCAGCGTTGGAAAATGGATGAACAAAGGAAATTGGAAGCGGCGCGATTGGCTGAAGAAACAGCACTGGCAATAGCTGAGAAGGAGAAATTAAAATGTCAAGCAGCCATGGAGGCAGCAGAAGCAAGCCGGAAAATCGCAGAGTTGGAAGCACAAAAAAGAATGAACGCAGAAATGAAAAGCATGACAGAATCTGAGCAGAAGAACAGGCCAGGAGACAGTATTTCATATGGAGCCAGGTACAGAAGATACACTATTGAGGAAATAGAAGAAGCCACAAACTTCTTTGCAGGCAATCTCAAGATCGGTGAAGGGGGCTATGGACCAGTCTACAAGGCTGAACTAGATCACACGCAGGTTGCAATCAAAGTGCTAAAACCAGATGCATCTCAAGGACGGTCACAGTTTCAGCAAGAGGTTGAAGTGCTAAGTTCAATAAGGCATCCCAACATGGTTCTCCTCCTTGGAGCATGCCCGGAGTACGGTTGTCTAGTGTACGAGTACATGGCGAATGGAAGCTTGGACGATTGCCTCTGCAGGAGAAGCAAAAACTCACCAGTTCTTCCCTGGCAGCTAAGATTCAGAATTGCAGCAGAGATAGCCACTGGCCTCCTTTTCCTCCACCAGGCAAAACCAGAACCGCTGGTGCACCGCGACTTAAAACCAGGAAACATTTTGCTTGACCGAAACTTTGTGAGCAAGATCAGTGATGTGGGGCTGGCTAGGCTTGTCCCTCCTTCAGTTGCAGACACCGTGACACAGTACCGCATGACAGCAACTGCCGGAACATTCTGCTACATCGATCCTGAGTACCAGCAAACAGGCATGCTTGGAATCAAGTCTGATATCTACTCACTTGGGATCATGCTTCTGCAGATGGTAACAGCAAAGCCTCCAATGGGTTTGACTCACCATGTTGGAAGAGCTATTGAGAGAGGGACATTTGCTGAGATGCTTGACCCTGCTGTTGAGGACTGGCCAGTTGAACATGCCTTGCATTTTGCAAAGATAGCACTGCAGTGTGCTGAGATGAGAAGAAAAGATAGGCCTGATCTTGGAAAAGTTGTGTTACCTGAGCTCAACAAGCTCAGAAACTTCGCTGAAGATAACATGCCTATGATGATGATGATGTTTGGTGGTAAAGCAGGATTTACTCCTAGAAGTAACAACAATTTTTCACGCTCTACATTTTCTTCCTCAGCCTCAGCTCAGGACTCTATGACTATGAGTGAATCAAACTCCTTATCTGGAATGTCTGGATATGAAAGTCGCTCAAGCACATCATCAATCAAGAAAATGTAA 2385 0.4541 MSRAIDKKLGAGRVVAVAIENNKTSQYAVKWAVDNILPKEQHLLLVHVRQRASSIPTPTGNNISLDGNDDVARAYKQQMDNESRELFASFRVFCNRKSILCKEVLLDDTDIAKAIIEGISSYSIELLILGAPSRSGLVRRFRTSDVPGVVSRGAPPFCTVYIISKGKISSVKTATSALPAKPTPKLQPQPVLSNEKMEAQLIRSHPPRPSAEKPAYLSRQIQDEDEMRSPFTRVGKPGHRSYESSIPDSDISFVSSGRPSIDRMFPMVYDEMDSTPRFSSGSDNDVRSFGSSFSGAKSIDQGDYSFCSQDSGTSMSSAPRFSSGDDVEAEMRRLRLELKQTMEMYSTACKEALTANQKALELQRWKMDEQRKLEAARLAEETALAIAEKEKLKCQAAMEAAEASRKIAELEAQKRMNAEMKSMTESEQKNRPGDSISYGARYRRYTIEEIEEATNFFAGNLKIGEGGYGPVYKAELDHTQVAIKVLKPDASQGRSQFQQEVEVLSSIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLCRRSKNSPVLPWQLRFRIAAEIATGLLFLHQAKPEPLVHRDLKPGNILLDRNFVSKISDVGLARLVPPSVADTVTQYRMTATAGTFCYIDPEYQQTGMLGIKSDIYSLGIMLLQMVTAKPPMGLTHHVGRAIERGTFAEMLDPAVEDWPVEHALHFAKIALQCAEMRRKDRPDLGKVVLPELNKLRNFAEDNMPMMMMMFGGKAGFTPRSNNNFSRSTFSSSASAQDSMTMSESNSLSGMSGYESRSSTSSIKKM* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0291 794 MobiDBLite consensus disorder prediction 229 257 - -
Lja4g0291 794 Gene3D Phosphorylase Kinase; domain 1 411 529 - -
Lja4g0291 794 ProSiteProfiles Protein kinase domain profile. 457 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0291 794 CDD STK_N 14 166 - -
Lja4g0291 794 Gene3D HUPs 13 163 IPR014729 -
Lja4g0291 794 Gene3D Transferase(Phosphotransferase) domain 1 530 737 - -
Lja4g0291 794 Pfam Protein kinase domain 462 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0291 794 Coils Coil 384 404 - -
Lja4g0291 794 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 4 793 - -
Lja4g0291 794 MobiDBLite consensus disorder prediction 755 794 - -
Lja4g0291 794 PANTHER OS02G0152300 PROTEIN 4 793 - -
Lja4g0291 794 Coils Coil 324 344 - -
Lja4g0291 794 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 152 - -
Lja4g0291 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Lja4g0291 794 Pfam Universal stress protein family 13 144 IPR006016 -
Lja4g0291 794 SUPERFAMILY Protein kinase-like (PK-like) 434 717 IPR011009 -
Lja4g0291 794 SMART serkin_6 457 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0291 Lja-Chr4 2273038 2278346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0291 7 750 Receptor kinase-like Gene Family AT1G78940 53.516 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lja4g0291 Pkinase 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0291 - - gmx:100803837 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0291 4 2273038 2278346 Lja4g0291 4 2273038 2278346 ECH
Lja4g0291 4 2273038 2278346 Lja2g1857 2 19185214 19191241 PCT