Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0279 ATGTTAAAGAAGGTCAACAAGATTTGCCAAATCGTGCAGCTGAAGCAGGTCATGAAGCGCTGGAAGAAAATCAGCCACCGCCCCCTCAACGACCCGGAACACCCGCCCTCTGGCTGCTTCTCCGTCCTCGTCGGCTACGAACAGCAGCCTTTCGCCGTCCCTGTGCTTTTCCTCAACCTCCCCGTCTTCGACGGCCTCCTCAAAGTAACCGAGGAGGAGTTCGGTCTCCGTGGCAAAAACTACGTGGCCTTCGCCTGCGATGTAAGCTTCTTCTCGTACATCCTCAAGTGCCTCCACAAGGACGAGCACAAGTACGGGAAGCTCTCTCTGGAACAGTTTGCTACCATGTTCGCCGATGCAGTGGCGGCGAAATCGGATTCTTGCAAGGGCCAAGACGTCAACGCTTTAACTACTACTCTGTTGCAGAAAGCATAG 435 0.5448 MLKKVNKICQIVQLKQVMKRWKKISHRPLNDPEHPPSGCFSVLVGYEQQPFAVPVLFLNLPVFDGLLKVTEEEFGLRGKNYVAFACDVSFFSYILKCLHKDEHKYGKLSLEQFATMFADAVAAKSDSCKGQDVNALTTTLLQKA* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0279 144 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR71-LIKE 8 125 - -
Lja4g0279 144 Pfam Auxin responsive protein 14 98 IPR003676 GO:0009733
Lja4g0279 144 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 125 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0279 Lja-Chr4 2198780 2199214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0279 2 102 Calmodulin-binding Proteins AT4G34750 34.615 1.33e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0279 K14488 - gmx:100793118 140.969