Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0273 ATGAAGTTGTCATCACTTTGGATTCTCAGCCTTCTCATTCTCTGCGATCTACTTCTCTCTCATCCTTCATTCGCCGATAAGTCGGAAACGGAGGAGCCGAAGCTTCTTCTACCGGAAACCAACGTAACCGCCATCGGTAATGCCTCGCTTGCGAGATCCAAGGATGACAGCTTCGCTACCATGATTGATCGGGCTCTCGAGAGGGAGTTCCCTGAGAATGAGCAGAATGAAGGCACTGATGATCCTGGTAGTTTCAACAACAGTGTTAATGATCAGCAGGCTGTTTTGGAAACTGTTGCAAGAGTTAAGTCCAAGAAAAATGAAAGCAAAGAGGAAAAGTCATTTCAGTTCCATGATGTTTTCAATTTGGATAATGAGAACCGGGCAGAGGACATGCCAACTTTAATTGATCGGAAGGACAATGTCTTTATCATATCCAATCCCAAGTCAAAATATCCTGTTCTTCAATTAGACTTGAGATTGATATCAGATCTTGTGGTTGTTATTGTCTCTGCCACCTGTGGTGGCATTGCCTTTGCTTGTGCTGGACAACCGGTTTTGACCGGATATCTGCTAGCAGGATCAATCATTGGCCCAGGAGGATTTGGTTTTGTTAGTGAAATGGTCCAAGTTGAGACAGTTGCTCAGTTTGGTGTCATTTTTTTGCTCTTTGCATTGGGCTTAGAGTTTTCCACAACAAAGCTTCGAGTTGTTCGAGCAGTGGCTATTCTTGGAGGTCTGCTCCAAATTTGTTTATTTATGTGCTTGTGTGGAATAACAGCTTCGTTATGTGGTGGTAAATCATCTGAAGGAATATTTGTTGGTGCATTTCTGTCCATGTCTTCAACAGCAGTGGTCTTGAAATTCTTAATGGAAAGGAATAGCATCAACGCCCTCCATGGTCAGGTCACAATTGGAACCTTGATTCTTCAGGATTGTGCAGTTGGTTTGCTCTTTGCATTACTTCCTGTCTTGGGTGGAACATCAGGTGTTCTTCAGGGAGTTATATCCATGACTAAATCGTTATTGGTATTACTTACATTTTTAGCCGTTTTGTCAATATTATCTCGTACTTGTGTACCGTGGTTCCTTAAGCTTATGATAAGCTTATCATCTCAGACCAATGAACTTTATCAGTTGGCATCAGTGGCGTTCTGTCTACTTGTTGCTTGGTGTAGTGATAAGCTGGGTTTGAGCCTGGAACTAGGTTCCTTTGCTGCAGGAGTGATGATATCAACGACAGATCTTGGTCAACATACACTTGAACAAGTTGAGCCAATTCGCAACTTTTTTGCGGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTCCTTTGGAATCATGTTGACATTTTACTGGCTGCTGTTATATTGGTGATCATTATAAAAACAATTGTAGCTGCAGCTGTTGTCAAGGGGTTTGGATACAACAACAAGACTTCAGTTCTTGTTGGGATGTCCCTAGCACAAATTGGGGAATTTGCTTTCGTTCTTCTCAGTCGTGCTTCAAATCTTCATTTAGTTGAGGGAAAGTTGTACTTATTGCTCTTGGGAACAACAGCTCTCAGTCTGGTGACTACACCATTGCTTTTCAAGCTCATTCCTGCTGTTGTGCATCTTGGTGCCTTGTTGCGGTGGTTCCCTCCTGACGGTCCAGCTGAGATTGCATTTAAAGCGGACAGTTTTCGAGCAGACAGTGCTAAGCGTATTACTTTGATGGTTCAAGGCTCTCATGATTCATGA 1752 0.4287 MKLSSLWILSLLILCDLLLSHPSFADKSETEEPKLLLPETNVTAIGNASLARSKDDSFATMIDRALEREFPENEQNEGTDDPGSFNNSVNDQQAVLETVARVKSKKNESKEEKSFQFHDVFNLDNENRAEDMPTLIDRKDNVFIISNPKSKYPVLQLDLRLISDLVVVIVSATCGGIAFACAGQPVLTGYLLAGSIIGPGGFGFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAILGGLLQICLFMCLCGITASLCGGKSSEGIFVGAFLSMSSTAVVLKFLMERNSINALHGQVTIGTLILQDCAVGLLFALLPVLGGTSGVLQGVISMTKSLLVLLTFLAVLSILSRTCVPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLGQHTLEQVEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVILVIIIKTIVAAAVVKGFGYNNKTSVLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDGPAEIAFKADSFRADSAKRITLMVQGSHDS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0273 583 Gene3D - 159 542 IPR038770 -
Lja4g0273 583 MobiDBLite consensus disorder prediction 68 88 - -
Lja4g0273 583 Pfam Sodium/hydrogen exchanger family 166 535 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja4g0273 583 Coils Coil 581 583 - -
Lja4g0273 583 PANTHER K(+) EFFLUX ANTIPORTER 6 9 583 - -
Lja4g0273 583 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 9 583 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0273 Lja-Chr4 2146130 2154985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0273 5 583 Antiporters AT2G19600 80.137 0.0 896
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0273 - - cam:101500554 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0273 4 2146130 2154985 Lja4g0273 4 2146130 2154985 ECH