Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0263 ATGTCCACCAATACTGGAATTCTTCAGAGTAAGAACTTGACCAAGTATATACTGGAGACCAGTGTTTTTCCACGAGAACCAAAGATTCTCAAAGAGTTAAGGGATGCCACTGCAAGTCACCCTTGGGGCTTCATGGGCACAGCACCCGATGCAGGTCAGCTAATGGCCTTACTCTTGAAGCTGCTGAATGCTAAAAAGACAATTGAGGTGGGAGTTTTCACTGGATACTCTCTTCTCCTCACAGCACTTAGCACTCCTGATGATGGAAAGATTGTAGCCATCGATCCAGACAGAGAAGCTTATGAGATAGGACAGCCATTCATAAAAAGGGCTGGTGTACAACACAAGATTGACTTTATAGAGTCTCCAGCTTTACCAGTTCTTGACAAACTCTTAGAAGATCCTTCAAATGTGGGAACTTTTGAGTTTGCCTTTGTTGATGCTGATAAACATAATTACTGGAATTACCACGAGCGGTTGGTTAAACTGGTTAAGATTGGAGGGTTGATTATCTATGATAACACCCTCTGGGGTGGAACTGTTTCCTGGCCTGAAGAGGATGTTCCTGCAAACAAAAGAGAATCCAGGCAAAGTGCACTGACTTTCAACAAAGCCATTGCAGGCGATTCACGCATTGAGATTTCTGTTGCTTCAGTAGGTGATGGCTTCACCATCTGCAGGCGTGCTCATTGA 693 0.4416 MSTNTGILQSKNLTKYILETSVFPREPKILKELRDATASHPWGFMGTAPDAGQLMALLLKLLNAKKTIEVGVFTGYSLLLTALSTPDDGKIVAIDPDREAYEIGQPFIKRAGVQHKIDFIESPALPVLDKLLEDPSNVGTFEFAFVDADKHNYWNYHERLVKLVKIGGLIIYDNTLWGGTVSWPEEDVPANKRESRQSALTFNKAIAGDSRIEISVASVGDGFTICRRAH* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0263 230 CDD AdoMet_MTases 68 172 - -
Lja4g0263 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
Lja4g0263 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Lja4g0263 230 PANTHER O-METHYLTRANSFERASE-RELATED 3 228 - -
Lja4g0263 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 228 IPR029063 -
Lja4g0263 230 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 3 228 - -
Lja4g0263 230 Pfam O-methyltransferase 20 228 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0263 Lja-Chr4 2045303 2047071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0263 6 230 Monolignol Biosynthesis Gene Families AT4G26220 62.667 2.08e-109 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0263 K00588 - gmx:100780516 385.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0263 4 2045303 2047071 Lja4g0263 4 2045303 2047071 ECH