Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0259 ATGGTTGAGAAGAGTGGAAGGAAGGAAGAGGTTGTTACCAGAGAGTACACTATCAACCTTCACAAACGCTTGCATGGATGCACATTTAAGAAGAAGGCTCCCAAAGCAATTAAGGAGATAAGGAAGTTTGCCCAGAAAGCCATGGGGACCAATGATGTCAGAGTCGACGTGAAGCTCAACAAGGCTATTTGGAGCCAGGGGATCCGAAGTGTCCCGAGGAGGATTCGGGTGCGTATTGCTCGCAAGAGGAACGATGATGAGGACGCAAAGGAGGAGCTCTACTCCCTTGTTACTGTTGTCGAGATCCCCAAGGAAGAGCTTAAAGGCTTGGGCACCAAGGTTATTGACGATGAGGATTGA 360 0.4889 MVEKSGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKAIWSQGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVVEIPKEELKGLGTKVIDDED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0259 119 SUPERFAMILY Ribosomal protein L31e 10 91 IPR023621 -
Lja4g0259 119 PANTHER OS06G0319700 PROTEIN 5 119 - -
Lja4g0259 119 Pfam Ribosomal protein L31e 10 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g0259 119 SMART Ribosomal_L31e_2 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g0259 119 ProSitePatterns Ribosomal protein L31e signature. 53 67 IPR020052 GO:0003735|GO:0005840|GO:0006412
Lja4g0259 119 CDD Ribosomal_L31e 8 91 IPR000054 GO:0003735|GO:0005840|GO:0006412
Lja4g0259 119 Gene3D - 8 119 IPR023621 -
Lja4g0259 119 PANTHER 60S RIBOSOMAL PROTEIN L31 5 119 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0259 Lja-Chr4 2014571 2016083 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0259 1 119 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.353 2.45e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0259 K02910 - gmx:100499742 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0259 4 2014571 2016083 Lja4g0259 4 2014571 2016083 ECH