Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0210 ATGGCTTGTTCAATTCGACCCACTCTCACTTCCTTTAGGTTTTCTTCAACTCGCTCCCTCTTCAACCCCTCTCCCTCACTCTCTTTCCTCCATCTATCCTCTGCAGTTCCACAATCTCATAGTTTTGGCCTGAAAGCAACCAGGCTGGTGAGACAAGATGGAAACTCAGTGAGAGCCATGGCGTCGCAGTCGGTTGCGGCGGCTGCTTCGCAAGAGAATGTGCTGGATTGGGTCAAACAGGACAAGCGGAGGATGCTTCATGTTGTGTACAGAGTTGGGGACCTGGACAGGACTATAAAATTTTATACAGAATGCTTGGGAATGAAGTTACTAAGGAAGCGTGACATACCGGAGGAAAGATATACTAATGCCTTTCTCGGATACGGGCCTGAGGACTCTCATTTTGTTGTTGAACTTACATACAACTATGGAGTTGACAAGTATGATATTGGAGCTGGATTTGGTCATTTTGGTATTGCTGTTGATGATATTGCAAAAACAGTGGAGCTAATAAGAGCCAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTTAAGGGAGGCAAAACAGTGATTGCATTTATTGAAGACCCTGATGGTTACAAATTCGAACTTTTGGAAAGAGGCCCTACTCCTGAGCCATTGTGCCAAGTAATGCTTCGAGTCGGAGATCTTAACCGTTCCATAGAATTTTATGAGAAGGCTTTTGGGATGGAGCTGCTTCGCACACGAGATAATCCAGAGTACAAGTATACTATAGCAATGCTCGGTTATGGTCCTGAAGATAAAAGTACTGTTCTAGAGTTGACTTACAATTATGGAGTCACTGAATACGATAAAGGAAATGCTTATGCTCAGATTGCAATTGGCACAGATGATGTGTACAAAACTGCGGAAGCAATTAAACTAGCCGGGGGGAAGATTACTCGGGAACCTGGACCATTACCTGGTATCAGCACAAAAATTACTGCATGCTTGGATCCTGATGGTTGGAAGTCGGTTTTTGTAGATAATGTTGATTTTGTTAAGGAGTTGGAGTAG 1041 0.44 MACSIRPTLTSFRFSSTRSLFNPSPSLSFLHLSSAVPQSHSFGLKATRLVRQDGNSVRAMASQSVAAAASQENVLDWVKQDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGAGFGHFGIAVDDIAKTVELIRAKGGKITREPGPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPEYKYTIAMLGYGPEDKSTVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLAGGKITREPGPLPGISTKITACLDPDGWKSVFVDNVDFVKELE* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0210 346 Gene3D - 211 346 IPR029068 -
Lja4g0210 346 CDD GlxI_Ni 215 336 - -
Lja4g0210 346 ProSitePatterns Glyoxalase I signature 1. 217 238 IPR018146 GO:0004462|GO:0046872
Lja4g0210 346 TIGRFAM glyox_I: lactoylglutathione lyase 70 217 IPR004361 GO:0004462|GO:0046872
Lja4g0210 346 TIGRFAM glyox_I: lactoylglutathione lyase 215 339 IPR004361 GO:0004462|GO:0046872
Lja4g0210 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 85 205 IPR004360 -
Lja4g0210 346 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 332 IPR004360 -
Lja4g0210 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 84 208 IPR037523 -
Lja4g0210 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 215 336 IPR029068 -
Lja4g0210 346 Gene3D - 55 209 IPR029068 -
Lja4g0210 346 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 213 IPR029068 -
Lja4g0210 346 ProSitePatterns Glyoxalase I signature 1. 87 108 IPR018146 GO:0004462|GO:0046872
Lja4g0210 346 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 214 338 IPR037523 -
Lja4g0210 346 CDD GlxI_Ni 85 206 - -
Lja4g0210 346 PANTHER LACTOYLGLUTATHIONE LYASE 19 346 - -
Lja4g0210 346 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 19 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0210 Lja-Chr4 1645426 1649620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0210 217 335 Calmodulin-binding Proteins AT1G08110 28.276 8.16e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0210 K01759 - gmx:100780463 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0210 4 1645426 1649620 Lja4g0210 4 1645426 1649620 ECH
Lja4g0210 4 1645426 1649620 Lja2g1985 2 20972899 20976352 PCT