Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0182 ATGCATTTATATCTCTCCTTCATCCCCATTCTCTTCAATTCCCCTCTCTCTCTCTCTCACTCTGCCATGGAAAACCAGAACCGTCTCAAAATGCGAATCTCTCGTATGTTCCGGTCCTCATTCGGTTCCTGCAGGACCCGAAACTTAACCGATGTAATGGAAAAACCAGTGTTCAATCCACCTGAGAATCTCCATAGCTTCCACTTCATAGACCCACCTTCTTCTTCCCCGAAAAACAGAGCATTTTCCTCTGTTTTCCGCTCTGAAACCTTCGACCACCGCCGTGCCGTGTCGGCTAAGGATTCTTCCACCAGACGCAACAAAATCTCAGAGTGTTCCTCACCGTTCCTCTGGGGTGTCATCCGCAACGGCAATGCCATTAACAACCTTGATGGAAGGTCGTGCCCCCCTGTTTCTCCAAACACTCCTTTGAATCACGAATTGGGTAAAACAAAGGAGAAAAACGTGAGGAGCAAGAAGAAAAAGAAGAAGAAGAAGCATGCCCAGAAGAAAAACAGAGCCAGAGAGTTTTTCCCTTTCAACTCTTGCGCTAAGGACACTGACTTTGGTGGTTACTGGTGGTACAGCAGCGATGAAGACGATGAAACGGACACACTTTTCTCTTCCCGGAGCCTTTCTTCTGATTCCTCCAGGTCCCGTCGCCGGAAAAATGACCGGAGCTCCTCCGACATGGGTGTTCTACCGCTGCAGGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAACGCTCCAGCGACCCGCACAGCGATTTCAGGACCTCGATGGTGGAGATGATAGTGGAGAAGCAGATATTTTCACCTGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTTTCTCTGAATTCGAATCATCATCACCAGATCATTGTTGAAGTTTTCACAGAGATTTGGGAAGCTCTGTTCTCTGAGTGGGGAATTTGA 939 0.4846 MHLYLSFIPILFNSPLSLSHSAMENQNRLKMRISRMFRSSFGSCRTRNLTDVMEKPVFNPPENLHSFHFIDPPSSSPKNRAFSSVFRSETFDHRRAVSAKDSSTRRNKISECSSPFLWGVIRNGNAINNLDGRSCPPVSPNTPLNHELGKTKEKNVRSKKKKKKKKHAQKKNRAREFFPFNSCAKDTDFGGYWWYSSDEDDETDTLFSSRSLSSDSSRSRRRKNDRSSSDMGVLPLQGKVKDTFAVVKRSSDPHSDFRTSMVEMIVEKQIFSPADLENLLQCFLSLNSNHHHQIIVEVFTEIWEALFSEWGI* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0182 312 ProSiteProfiles OVATE domain profile. 246 305 IPR006458 -
Lja4g0182 312 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 26 309 IPR038933 GO:0045892
Lja4g0182 312 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 26 309 - -
Lja4g0182 312 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 244 307 IPR006458 -
Lja4g0182 312 MobiDBLite consensus disorder prediction 155 172 - -
Lja4g0182 312 MobiDBLite consensus disorder prediction 132 146 - -
Lja4g0182 312 Pfam Transcriptional repressor, ovate 250 307 IPR006458 -
Lja4g0182 312 MobiDBLite consensus disorder prediction 200 233 - -
Lja4g0182 312 MobiDBLite consensus disorder prediction 132 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0182 Lja-Chr4 1440794 1441936 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja4g0182 Ovate 5.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0182 - - gmx:100776613 342.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0182 4 1440794 1441936 Lja4g0182 4 1440794 1441936 ECH