Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0155 ATGTTTTCTGCAGCAATAGTAGTAGTACAAGCTTGCCTTGTTTTCATGTTCATACATATAATTTTCAGATTGTTGTTGCAACCAAAAAAACAAAGAAACATAGATGGGAAAAAACCACCAGGTCCATCATCACTACCAATCATTGGCAACCTTCACATGATAGGTACCTTGCCTCATCGTACACTTCAATCCCTGTCCCAAAAACATGGTCCCATCATGTCCCTGAAACTGGGAAAACTTCCAACTATTGTGGTTTCATCCTCTGAAACCGCTGAGCTGTTCCTCAAAACGCACGACCTCGTTTTTGCAAGCAGGCCAAAGGTTCCAGTATCTAAGATCTTGTTCTACGGAAACAAAGGGTTGGCGTTTTGTGAGTATGGTTCGTACTGGCGTAGCGTGAAGAAGGTGTGTGTTTTGCAGCTTCTTACGACGTCGAAAATTGAGCTGTTTGCTCCTATTAGGAAGGAGGAGCTTGGTGTGGTGGTGAAGTCGCTGGAGGAAGCTGCAGCAGTGGGTGAGGTTGTGAATCTTAGCAAGGTTTTGGAGAATCTTGCAGAGGATATAGTGTATAAGATGATATTGGGGTGTAGTAAGAATGATGAACATGATTTGAAGAGGCTAATTCATGAAGCTCTCACTTTGCTTGGAACTTTTGATCTTGCTGATTTTGTGCCTTGGATAGGCCCATTTGACCTTCAGGGATTAACACGGAGGTGCAAGAAAACCAGTAAAGCACTTGATGTGGTGCTGGAGAAGATAATAACAGAGCATGAACAAACTGCTAATAAGGAAGGCAAAACCCATCATCATCACAAAGACTTTGTAGACATACTACTCTCAATGATGAACCAACCTCTGAATTCCCAAAACCATGTCATCATCATGGACCGAACTCACATCAAGGCTATTTTACTAGACATGATTATAGCCTCAATTGAAACATCAGCAACCGTGATCGAATGGGCTTTATCAGAACTCTTGAGCCATCCAAGGGTGATGAAAATCCTACAAGATGAGATAGACAATGAAGTGGGAATTTCAAGAATGGTGGAGGAGAATGATTTGGTGAAGTTGAGTTACTTGGACAATGTTGTGGATGAGACATTAAGGTTGCACCCTGTTGCACCCTTACTAATCCCTCGTGAATGCAGAGAGAGCATCACAATCAATGGCTATTACATAGAGAAAAATTCAAGAGTCATAGTAAATGTTTGGGCAATAGGGAGGGATCCTAATGTTTGGTCAGAAAATGTTGAAACATTTTATCCAGAGAGATTTGTCAACAAGAAAATGAATTATCAGGGGAAAGAGTTTCATTCAGTACCATTTGGTTCAGGACGTAGAGGTTGTCCTGGGGCTCAACTGGGTTTGGTTACTGTTAAACTGGTTTTAGCTCAATTGGTGCATTGCTTTAATTGGGATCTTCCTTCAAATATTAGTCCTGCCAATTTGAATATGCAAGAGAAATTTGGGCTCACCATAACAAGAGTTCAGCAGTTGCAGGCAATACCCACTTCTCGTTTAGCTAATGATGCATAG 1539 0.4146 MFSAAIVVVQACLVFMFIHIIFRLLLQPKKQRNIDGKKPPGPSSLPIIGNLHMIGTLPHRTLQSLSQKHGPIMSLKLGKLPTIVVSSSETAELFLKTHDLVFASRPKVPVSKILFYGNKGLAFCEYGSYWRSVKKVCVLQLLTTSKIELFAPIRKEELGVVVKSLEEAAAVGEVVNLSKVLENLAEDIVYKMILGCSKNDEHDLKRLIHEALTLLGTFDLADFVPWIGPFDLQGLTRRCKKTSKALDVVLEKIITEHEQTANKEGKTHHHHKDFVDILLSMMNQPLNSQNHVIIMDRTHIKAILLDMIIASIETSATVIEWALSELLSHPRVMKILQDEIDNEVGISRMVEENDLVKLSYLDNVVDETLRLHPVAPLLIPRECRESITINGYYIEKNSRVIVNVWAIGRDPNVWSENVETFYPERFVNKKMNYQGKEFHSVPFGSGRRGCPGAQLGLVTVKLVLAQLVHCFNWDLPSNISPANLNMQEKFGLTITRVQQLQAIPTSRLANDA* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0155 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 508 - -
Lja4g0155 512 Pfam Cytochrome P450 39 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 SUPERFAMILY Cytochrome P450 39 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 Gene3D Cytochrome P450 24 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Lja4g0155 512 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 508 - -
Lja4g0155 512 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0155 512 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0155 Lja-Chr4 1195679 1198429 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0155 37 508 Cytochrome P450 AT3G26330 40.664 1.17e-125 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0155 - - gmx:100798918 610.912