Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0152 ATGTTGCTAATGCTTCCTTCGATTCCCCTGCTCCTCCTTTTCACATTCACTACCCTCATTCTCTCCGCCACCTTGTTCCGCCGCCGCAAACATGGTCGGAGACGTCCACCGGGTCCACGGGGTTTGCCGGTGATCGGCAACCTCCACAGGTTAGGGAAGCTCCCTCACCGCACCCTACAAGCCTTAGCCAAACTATATGGACCCATCATGTCCCTTCAGCTCGGACAGGTCCCAACCGTTATAGTCTCTTCCTCTGAAGCTGCAGAGCAATTCCTGAAAACCCACGACCTCGTTTTCTCTAGCCGGCACAGAATCCAAGCCACCCAGTACATCGCTTATGGCTCCAAAGGCTTGGTGTTTTCTGAATATGGTCCTTACTGGCGTAACATGAGGAAGCTCTGCACCCTGCAACTTCTCACATCTTCCAAAGTTGAGTCGTTTGCACCTTTGAGGATGAGGGAGGTGCAAGTAGCGGTGAAGTCGCTTGAGAAAGCTGCGACGGCGAGTGAGGTCGTTGACCTTAGCGAGGTGGTGAACAACCTTTTGGAGGACATTGTGTACAAAATGGTGTTGGGGTGTAGTAAGGATGATGAGTTTGACTTGAAGGGGCTTATTCAACGTGGTATGAACCTCAGTGGAACCTTTAATCTTGCAGATTATGTGCCTTGTCTTGGAGTTTTGGACCTTCAGGGATTGAAACGAAGCTTTAAGGAAACTAGTAAAGGAATTGATCAAGTGTTGGAGAAGATCATTCAGGAGCATGAAAGTGGTTCAAATGTGCAAAATGGTGGGCACCATAAGGACTTCACAGACATTTTACTCTCACATATGAACCAACCTATTGATTCCAATGATGAACATAGTCATGTCATTGATCGAACTCACATTAAGGCTATCATCTTAGATATGATTGCTGGGGCATTTGAAACTGCTGCAACTGTTGTGGAGTGGGCTTTATCTGAGCTCCTGAGACATCCAAGAGTGATGAAAAACCTTCAAGATGAGCTAGATAATGTGGTTGGACTGAACAAACTGGTGGAGGAGGATGATTTAGCAAAGCTGAATTACTTGGATGCTGTGATTAATGAGGCATTAAGATTATATCCTCCGGGACCACTAGTCCCTCGTGAGTCAATAGAGGATGCTATGGTTCATGGTTATTTCATAGAGAAAAAGTCAAGAATCATCTTAAATTTATGGGCTATAGGAAGAGATTCTAAGATATGGTCGGATAATGCTGAAGAATTTTATCCTGAGAGATTCACCAATAACAGTTCAGACTTTCGGGGACATGACTTCAAATTTATACCTTTTGGTTATGGTCGCAGAGGATGCCCTGGCATGAACTTAGGCATAGTTACGGTTAAACTTGTTGTTGCTCAATTAGTACATTGCTTTTCTTGGAAGCTTCCACCCCATACAAGTCCAATAGACTTGGACATGAGTGAGAAATTTGGCCTCACAATACCAAGAGTTAAACACTTGTTTGGTGTGCCAACATATCGTCTTATGAGGGAAACACTTGACAGATCAAGCTGA 1539 0.4496 MLLMLPSIPLLLLFTFTTLILSATLFRRRKHGRRRPPGPRGLPVIGNLHRLGKLPHRTLQALAKLYGPIMSLQLGQVPTVIVSSSEAAEQFLKTHDLVFSSRHRIQATQYIAYGSKGLVFSEYGPYWRNMRKLCTLQLLTSSKVESFAPLRMREVQVAVKSLEKAATASEVVDLSEVVNNLLEDIVYKMVLGCSKDDEFDLKGLIQRGMNLSGTFNLADYVPCLGVLDLQGLKRSFKETSKGIDQVLEKIIQEHESGSNVQNGGHHKDFTDILLSHMNQPIDSNDEHSHVIDRTHIKAIILDMIAGAFETAATVVEWALSELLRHPRVMKNLQDELDNVVGLNKLVEEDDLAKLNYLDAVINEALRLYPPGPLVPRESIEDAMVHGYFIEKKSRIILNLWAIGRDSKIWSDNAEEFYPERFTNNSSDFRGHDFKFIPFGYGRRGCPGMNLGIVTVKLVVAQLVHCFSWKLPPHTSPIDLDMSEKFGLTIPRVKHLFGVPTYRLMRETLDRSS* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0152 512 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 Coils Coil 329 349 - -
Lja4g0152 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g0152 512 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 SUPERFAMILY Cytochrome P450 26 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 504 - -
Lja4g0152 512 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 504 - -
Lja4g0152 512 Pfam Cytochrome P450 36 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g0152 512 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0152 Lja-Chr4 1167075 1168776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0152 28 498 Cytochrome P450 AT3G48310 39.368 4.24e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0152 - - gmx:100814172 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0152 4 1167075 1168776 Lja4g0152 4 1167075 1168776 ECH
Lja4g0152 4 1167075 1168776 Lja2g2073 2 22832491 22835121 PCT