Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0147 ATGAATTCCCCATCTGATTATAACTACAGAGAATTGGGCAGCCCAAATGGAACTATGGATGGAAATAATAAAAATGGGCATTTAGTGTCCATTAATGGTGAGGTGGAAGCCAAACATCGGTTGCTTTTGGTTCAGTGGTTAACTAGTCTTCTTCCTTTACTGAACTTCTCGGCAAGCGTCACGGATGGTGAGTTAAGAGCATGCTTGAGCAATGGCACAGTTTTGATCCAGATATTGAACAGGCTAAGACCTGGTTCCGTGACTTTGGTGAGTGAATCTGATCATTCTCTGCCGTCACAATCAGAAAATGTTAAAACGTTTCTGAAAGCATTGGATGGATTGGGGTTGCCCCGGTTTGAAATTTCAGACCTAGAGAAGGGATCTATGAAGCCTGTTGTGGATTGTCTATTAACACTTAGAGCAAGAAGTTTGCAAAATGCTTTGGCAGACAATATTTGTGTAAGCCCTCGTAGTCGTGGGAGTTCACCTTCAAGTAACCCATATTCTCCTCCATCTTTTGGTGGAGACCAGAGGAAGGAGTCAAGGTTTCAACGTCTTTTGAGTAGCCCTGTTATGGCAGAACCATCAGCTTCATTAATACACTATGCCGGTCATAAGTTCCATGAGGTGTTTCAAATAAAACCTGGAAGCTTTGCAGATCTTCCGGCAGCAAAAATATCAGAAATGATGAAATCTAACAGTTTAGATAATGCTCCCACCCAATCGCTTCTAAGTGTAGTCAACGGTATTCTTGAAGAAAGCGTTGAAAGAAGAAATGGAGAAATACCTCAGCGTGTGGCAGTCTTGTTGCGAAGAGTTTCTCAGGAGATTGAGCGGCGCATATCAACTCAAGCAGAACATATACGAACTCAAAATAATCTTTTCAAGGCCCGGGAAGAAAAATATCAATCGAGAATAAAAGTACTCGAGGCACTTGCATCTGAAACTAGAGAAGAGAGTGAGGCTGACAAAATCAAAGAGGAAGAAAGGCAAGAAGATGAATCAGATATTATCAGATTGATATTGCAGGAGCAGGAGGACAAAAATTTGGAAATCGCAAAATTGCAGCGAGAACTAGAAACATGTGAAGCACAATGCTTACAGTTGGAAGAAGAGGCTAAAGTTGCTATAGATGAATTGAGACACAAGTCTCAAGAATACGAGCATCAATTGGAAGAATTAAGAAACAAGATCAAAGAGGAAGGAAAGAAAGCAGATGAAAAAGATGTGATCAGATGGATGAAGGAGCACGACGACAAAAAATTGGAAATTTCCGCGTTGAAGCAAGAACTAGAAACAGCCAAAAAAACATGTGAAGTACAGTGCTTACAGCTGGAAGAAGAGACTAAGGTTGCTAAAGCAGAATTGAGACAGAAGTCTCAAGAATATGAGTGTCGATTGGAAGAATTAAGAAATAAGAAATTGAAACTATCTTGGGAATCCATTAAGCAAGATGTTATGAAAGAGCAAAAAGCTTGTGCAGAGGAGTGTGGTCGATTAGGTGTAAATCTTAAACCACTGGTACATGCAGCTCAGAGCTATCAAGTTGTTCTTGCTGAAAACCGGAAACTGTTTAATGAAGTTCAAGAATTAAAAGGAAACATCAGAGTATATTGTCGAATTCGACCATTTCTTACTGGAAAAGGGGAAAGACAGACTATTATACAACATATTGGTGAAAATGATTTGGTTGTGGCACATCCTTCCAAAGAAGGGAAAGATGCTCTTAAATCATTTAAGTTTAATAAGGTCTTCGGCCCTGCCTCAACTCAAGTTGAGGTATACTCTGACATTCAATCCTTTGTTAGATCAGTACTCGACGGGTATAATGTATGTATGTTTGCTTATGGCCAAACTGGATCGGGGAAAACTTACACAATGACTGGTCCAAGTGGAGCAACAAGCGAGGATATTGGTGTTAATTATCGAGCTCTAAATGACTTATTCAGCATTTGTACAAGTAGAGCAAGCCTCATAGACTATGAGATTGGGGTTCAAATGGTTGAGATATACAATGAGCAAGTTCGTGACTTGTTAACAACAGATGGTTCTCCCAAAAAACTTGGGATATTGACTCACTCTCCATCCAAGGGTTTAGCAGTGCCTGATGCTAGCATCTTCCCTGTCAAATCACCTTCAGATGTCATTAAGCTAATGGACATTGGGCTTAAAAATAGAGCCATTGGTGCAACTGCTATGAATGAAAGAAGTAGCCGTTCACACAGTGTGATCTCAATTCATGTTCGTGGGAAGGAATTGAAGTCTGGTTCTACTCTGCTTGGTAATCTTCATTTGGTAGATTTGGCAGGTAGTGAAAGGGTAGATCGCTCTGAAGTAATTGGGGATAGGCTTAAGGAAGCACAGCATATAAACAAATCATTATCTGCTCTTGGAGATGTCATTTTCGCTCTTTCTCAAAAGAGTCCCCATGTACCATACAGAAATAGCAAGCTCACTCAACTCCTGCAAACTTCTCTTGGTGGTCAAGCAAAGACACTCATGTTTGTCCAAATTAACTCAGACGTGAGTTCATATTCTGAAACTCTGAGCACTTTAAAGTTTGCTGACAGAGTTTCCGGAGTTGAATTAGGAGCTGCGCGAAGTAACAAAGAGAGCAAAGATGTCAGGGAATTAATGGAACAGATGGCTTCTATGAAGAACACTATTTTGAAAAAAGATGAGGAGATTGAGCGGCTTCAATCACTGAACGCTTCAGTTGGTGGTGTTCCTAAGAAAAACCGAAGACTGCCAAGTTATAAGAACCTTGAAGCTTCTACGGAGCAACCAATGGATGGTCATATACACCAAAATGAGCTTCTCCATCAATCTGAAATTACTAGGGGAGATATACGAAGGAATATTGCTTCAACTGCAGAAACTTCGGGGTCTGCAGATTCTGATTCTCATGAAGGATCAAGTGATGTTTCTGACAATGGTGTTGTTCCGGGCACAGAAACTGATGGCTCTTCAGAAAATTCAAGTCTTACTGAAGTCAAAAAATCATTAGAAAAGACGGAGAAATCCAAAGCATTACCCAAAATTGTTCGAACGGTTAGGAAATTAGACCGAACCCCATCTCTGACGCCTGCATTAAAGGACTCCCAGAAGAAGCCACCAGCATCATCAGGTATTAAAAAAAGCGCTAGTATTGGCCAACTTAAAGCTGCAAAACGGTGGCAGTAA 3183 0.4059 MNSPSDYNYRELGSPNGTMDGNNKNGHLVSINGEVEAKHRLLLVQWLTSLLPLLNFSASVTDGELRACLSNGTVLIQILNRLRPGSVTLVSESDHSLPSQSENVKTFLKALDGLGLPRFEISDLEKGSMKPVVDCLLTLRARSLQNALADNICVSPRSRGSSPSSNPYSPPSFGGDQRKESRFQRLLSSPVMAEPSASLIHYAGHKFHEVFQIKPGSFADLPAAKISEMMKSNSLDNAPTQSLLSVVNGILEESVERRNGEIPQRVAVLLRRVSQEIERRISTQAEHIRTQNNLFKAREEKYQSRIKVLEALASETREESEADKIKEEERQEDESDIIRLILQEQEDKNLEIAKLQRELETCEAQCLQLEEEAKVAIDELRHKSQEYEHQLEELRNKIKEEGKKADEKDVIRWMKEHDDKKLEISALKQELETAKKTCEVQCLQLEEETKVAKAELRQKSQEYECRLEELRNKKLKLSWESIKQDVMKEQKACAEECGRLGVNLKPLVHAAQSYQVVLAENRKLFNEVQELKGNIRVYCRIRPFLTGKGERQTIIQHIGENDLVVAHPSKEGKDALKSFKFNKVFGPASTQVEVYSDIQSFVRSVLDGYNVCMFAYGQTGSGKTYTMTGPSGATSEDIGVNYRALNDLFSICTSRASLIDYEIGVQMVEIYNEQVRDLLTTDGSPKKLGILTHSPSKGLAVPDASIFPVKSPSDVIKLMDIGLKNRAIGATAMNERSSRSHSVISIHVRGKELKSGSTLLGNLHLVDLAGSERVDRSEVIGDRLKEAQHINKSLSALGDVIFALSQKSPHVPYRNSKLTQLLQTSLGGQAKTLMFVQINSDVSSYSETLSTLKFADRVSGVELGAARSNKESKDVRELMEQMASMKNTILKKDEEIERLQSLNASVGGVPKKNRRLPSYKNLEASTEQPMDGHIHQNELLHQSEITRGDIRRNIASTAETSGSADSDSHEGSSDVSDNGVVPGTETDGSSENSSLTEVKKSLEKTEKSKALPKIVRTVRKLDRTPSLTPALKDSQKKPPASSGIKKSASIGQLKAAKRWQ* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0147 1060 Pfam Kinesin motor domain 540 859 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 PANTHER KINESIN-LIKE PROTEIN KLP-3 419 473 - -
Lja4g0147 1060 PANTHER KINESIN-LIKE PROTEIN KLP-3 358 416 - -
Lja4g0147 1060 Pfam Calponin homology (CH) domain 43 141 IPR001715 GO:0005515
Lja4g0147 1060 Gene3D - 32 145 IPR036872 -
Lja4g0147 1060 SMART kinesin_4 532 869 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 MobiDBLite consensus disorder prediction 155 172 - -
Lja4g0147 1060 ProSiteProfiles Calponin homology (CH) domain profile. 37 144 IPR001715 GO:0005515
Lja4g0147 1060 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 419 473 - -
Lja4g0147 1060 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 358 416 - -
Lja4g0147 1060 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 8 333 - -
Lja4g0147 1060 MobiDBLite consensus disorder prediction 155 177 - -
Lja4g0147 1060 Coils Coil 417 480 - -
Lja4g0147 1060 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 473 1060 - -
Lja4g0147 1060 MobiDBLite consensus disorder prediction 1 25 - -
Lja4g0147 1060 ProSiteProfiles Kinesin motor domain profile. 534 861 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 Coils Coil 299 319 - -
Lja4g0147 1060 Gene3D Kinesin motor domain 475 863 IPR036961 -
Lja4g0147 1060 Gene3D - 405 446 - -
Lja4g0147 1060 SMART ch_5 39 142 IPR001715 GO:0005515
Lja4g0147 1060 MobiDBLite consensus disorder prediction 997 1020 - -
Lja4g0147 1060 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 534 898 IPR027417 -
Lja4g0147 1060 Coils Coil 875 902 - -
Lja4g0147 1060 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 333 - -
Lja4g0147 1060 PANTHER KINESIN-LIKE PROTEIN KLP-3 473 1060 - -
Lja4g0147 1060 SUPERFAMILY Calponin-homology domain, CH-domain 35 140 IPR036872 -
Lja4g0147 1060 MobiDBLite consensus disorder prediction 957 1060 - -
Lja4g0147 1060 MobiDBLite consensus disorder prediction 957 996 - -
Lja4g0147 1060 Coils Coil 338 404 - -
Lja4g0147 1060 PRINTS Kinesin heavy chain signature 731 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 PRINTS Kinesin heavy chain signature 811 832 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 PRINTS Kinesin heavy chain signature 762 780 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lja4g0147 1060 PRINTS Kinesin heavy chain signature 608 629 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0147 Lja-Chr4 1107540 1114668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0147 407 895 Calmodulin-binding Proteins AT5G65930 35.700 6.04e-71 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0147 K10406 - zju:107406719 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0147 4 1107540 1114668 Lja4g0147 4 1107540 1114668 ECH
Lja4g0147 4 1107540 1114668 Lja2g2093 2 23134994 23140890 PCT