Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0137 ATGTTGGTTTTGGTACTTCAAAATCATTTGGATGGTGGACACCCCCACAACTCTGTGGTCTCAATTTCTGTGCTCAGGTGCTGCTTGGCATGTGCATGTAGAGTTCTGTTTGTGAAGATGTGCACATCACGGAAGAAAATTCACAAAGATAAGGATGCTGAGCCTACTGAGTTTGAAGAGTCAGTTGGGCAGGATGGCACCAAATGTAGCTGCAGGTGTGACATCAGAGGCAATATAAATTCTTCAGGATCTCCGTTTGAAATGGATGTAATTCTATTGAGGCTACCAAAGGAAGGTTCTACTGTTCAACCTCTCCGCACCCGAACCCTTACTGCTGTTTATGAAGCAATGCTGGGGGATGTCATATCGCCTGCTGAGATTGTTGGGAAGCGTGAGGTTTCGAGTTGA 408 0.4559 MLVLVLQNHLDGGHPHNSVVSISVLRCCLACACRVLFVKMCTSRKKIHKDKDAEPTEFEESVGQDGTKCSCRCDIRGNINSSGSPFEMDVILLRLPKEGSTVQPLRTRTLTAVYEAMLGDVISPAEIVGKREVSS* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0137 135 PANTHER 40S RIBOSOMAL PROTEIN S7 93 131 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja4g0137 135 PANTHER 40S RIBOSOMAL PROTEIN S7 93 131 - -
Lja4g0137 135 PANTHER 40S RIBOSOMAL PROTEIN S7 26 64 - -
Lja4g0137 135 PANTHER 40S RIBOSOMAL PROTEIN S7 26 64 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lja4g0137 135 Pfam Ribosomal protein S7e 100 131 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0137 Lja-Chr4 1052024 1054027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0137 40 131 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 35.714 1.05e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0137 K02993 - gmx:100499757 87.0409