Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0136 ATGCAGGTGTTTAGGAATGCTGGAGCTGATGAAACATATGAAGTCAAGAAGATGGATTACCAAGATTCTCTACAGCTCTTCAGTTTAAATTCCTTTAAACAAATCTTTCCCGTGAAGAGTTATGCAGACTTGGTAGAAAAGGTATTACAATATGCTCAAGGGGTTCCATTAGCTCTCAAAGTTTTAGGCTCACTGCTTTGTGGTCAAGAGATGAAAACATGGGAAGATGAGTTGGAAAAGTTGAAAGTGCTTCCCAATGTTGATATTTTTAATGTGTTGATATTAAGTTACGAGGGCTTGGACCGTTTGCAGAAGGACATATTTCTTGACATAGCTTGCTTTCATGCAGGCAGTTTTGTGAATAGAGTAGTGGAATTGCTAGATAGTTGTGGTTTCAAGGCTGAAAGTGCAATGAGATTCCTCAAAGATAGGTGCCTTATATCTATTTTGGGAGATCGAGTCATGGTGCATGATCTAATACTGGAAATGGGAAAAGAAATTGTTTGTCGACAATGTGTCCATGATCCTAGAGAACGCAGTCGTTTATGGAACCACACTGAAATTTGCAAGGTTTTAAAAATGAAGAAGGGGAAAGCTGCAATCCATTGTATATTCCTCGACATCAGCCAAATACAAAATGTTAAAGTACATCGAAAATTTTTCAATAGCATGCATAATCTGAGAATGCTTTATTTTCATAAGCATTATTCTTTGCCGAATGGTTTAGAAAGTGAACCACATTTTGTCATTCCTAAAGTTCTTGAAAGTCTTCCTGATAGTTTAAAAGTTCTTCATTGGGATGAATTTCCTCAAAGATCTTTGCCGCTGGACTTTTGCCCAGAAAATCTTGTTGAACTTCGTATGCGCCATATCCATCTTGAACAATTTTGGGAGAACGATCAGGAATTACCAAATTTGAAAAGGCTCGATCTTAGTAATTCTTGGAAACTGATTCGAATACCAGACCTTTCTAAGTCTCCAAATATTGAAGAAATAATTCTCTCTAGTTGTGAATCCCTTACAAGCCTTCCAATCGACCTTTGTAAGTTGAAATCGCTTAGAAGACTTGATCTGAATTGTTGCAAAAATTTGGAAAAATTCCCTGAAATCATGGAGACAATGGAACATTTAGCTGTGCTTATCTTAGGCGAAACAGCAATTCAAGCACTACCTGCATCCTTGCACCTTTTGGTGGGGCTTGGAGAATTGAGCTTGATGTTTTGCTCAAAGCTTGAGATTATTCCAAACAGCATTTGTAATCTAAAGCTTCTCTCTAAGCTTGACTGTTCAGGCTGTGGTAAATTAACAGGAATACCAGATGACATAGGTCGCATGCTATCATTAAGGAAATTGTCACTGCAAGGCACCAAAATCGTGAACCTTCCAGATAGTATTGCTCATCTTTCAAGCTTGGAATCACTTAATGTAAGTGATTGCAAAAAGCTTGTCTTTATCCCACAACTTCCACCATTTTTGAAAGAGTTATTGGCATTTGATTGCCCATCCATAACAAGAGTGGTGCCAAACCCATCAGATACCAAAGAGGGTACCTTCGAATTTCATTTAACCAATAATGATGAACAGGATCTAAGGGCTCATGGTGATGTTGTGGCCGATGCAAGGAATAGGATCATTGAGGATGCATCTAGGTTTGTGTACTATTGCTTTCCAGGGAGTGCAGTTCCTGATTGGTTCTCTTATCGTGGCGCGGGAAATTCAGTAACTGTGGATTAA 1734 0.3852 MQVFRNAGADETYEVKKMDYQDSLQLFSLNSFKQIFPVKSYADLVEKVLQYAQGVPLALKVLGSLLCGQEMKTWEDELEKLKVLPNVDIFNVLILSYEGLDRLQKDIFLDIACFHAGSFVNRVVELLDSCGFKAESAMRFLKDRCLISILGDRVMVHDLILEMGKEIVCRQCVHDPRERSRLWNHTEICKVLKMKKGKAAIHCIFLDISQIQNVKVHRKFFNSMHNLRMLYFHKHYSLPNGLESEPHFVIPKVLESLPDSLKVLHWDEFPQRSLPLDFCPENLVELRMRHIHLEQFWENDQELPNLKRLDLSNSWKLIRIPDLSKSPNIEEIILSSCESLTSLPIDLCKLKSLRRLDLNCCKNLEKFPEIMETMEHLAVLILGETAIQALPASLHLLVGLGELSLMFCSKLEIIPNSICNLKLLSKLDCSGCGKLTGIPDDIGRMLSLRKLSLQGTKIVNLPDSIAHLSSLESLNVSDCKKLVFIPQLPPFLKELLAFDCPSITRVVPNPSDTKEGTFEFHLTNNDEQDLRAHGDVVADARNRIIEDASRFVYYCFPGSAVPDWFSYRGAGNSVTVD* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0136 577 SUPERFAMILY "Winged helix" DNA-binding domain 88 193 IPR036390 -
Lja4g0136 577 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 540 - -
Lja4g0136 577 SUPERFAMILY L domain-like 201 508 - -
Lja4g0136 577 PRINTS Disease resistance protein signature 52 66 - -
Lja4g0136 577 PRINTS Disease resistance protein signature 301 317 - -
Lja4g0136 577 Gene3D - 18 101 IPR042197 -
Lja4g0136 577 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 540 IPR044974 GO:0006952
Lja4g0136 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 111 IPR027417 -
Lja4g0136 577 Gene3D Ribonuclease Inhibitor 375 515 IPR032675 -
Lja4g0136 577 Gene3D Ribonuclease Inhibitor 200 374 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0136 Lja-Chr4 1040852 1044969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0136 2 481 WRKY Transcription Factor Family AT4G12020 32.879 8.82e-61 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0136 - - lja:Lj3g3v0423910.1 1159.44