Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0135 ATGCTTATTGATCGTATTGCACAAGATATTTTCAAAAAATTGAATCCTCCTTTCTCTCAAGGAATGCTTGGAATTGACAAGCATATTGCACAAATCCAGTCCTTGTTGCAGCTTGACTCAGAAGCTGTTCGGATCATAGGAATTTGTGGCATGGGAGGAATAGGTAAAAGTACATTGGCTGAGGCACTCTATCACAAACTGGGGACCCAATTCAGTTCCAGATGCTTGATTGTGAATGCTCAACAAAAAATAGACAGATATGGAATATACTCTCTACGCAAAAAATACTTATCAAAACTTCTAGGGGAAGATATTCAGTCAAATGGATTAAATTATGCAATTGAAAGGGTCAAACGGGCAAAGGTTCTCCTTATTCTTGATGACTTGAAAATTTCAATTCCAATTCTAGAATTGATTGGAGGGCATGGAAACTTCGGCCAGGGAAGTAGAATCATTGTGACTAGCAGACACCGGCATGTGCTTAAGAATGCTGAAGCTGATGAAATATATGAAGTCCAGGGGATGAGTTACCAAGACTCTTTGGAGCTCTTCCGTTTAAATGCCTTTAAGGAAGACTATCCCCTAGAAGGTTATGCGAACTTGATAGTAGAGGTATTAAAATATGCTAAAGGGGTTCCATTAGCTCTACAAGTTTTAGGCTCACTGCTTTATGATAAAGAAAGGGAAGTATGGGAAAGTGAGTTGAAAAAGTTGAAAGAGCTTCCCAATGTTGATATTTTTGATGTGCTGAAATTAAGTTATGATGGGCTGGATGATGAACCGAAGGACATATTTCTTGACATTACTTGCTTCTATGCAGGCGATTTTGTGGATAAAGTAGTGGAATTGCTAGATAGTTGTGGTTTCTCTGCTGACATTGGAATGGATGTCCTCAAAGATAGGGGCCTTATATCTATTTTGGAAGATCGAATCGCGGTGCATGATCTAGTATTGGAAATGGGAAGAGAAATTGTTCGTCAACAATGCGTCAGTGATCCAGGAAAACACAGTCATCTATGGAACCATAAAGAAATTTACCATGTTGTAAGAAAGAACAAGGGGACGGATGCAATCCAGTGTATATTCCTTGACATGTGCCAAATAGAAAAAGTTCAACTACATCCAGAAATTTTCAAAAGCATGCCTAATATAAGAATGCTTTATTTCCATAAGCATTCTTCTTTTAAACAAGGTCAATCAAATGTGATCGTTCCTGATTTACTTGAAAGTCTTCCGAATGGTTTAAAAGTTCTTCATTGGGATGAATTTCCTCAAAGATCTTTTCCGCTGGACTTTTGTCCAGAAAAGCTTGTTAAACTTCACATGCGTGAAAGCCGTCTTGAACAACTTTGGGGGGATGATCAGGAATTACCAAATTTGGAAAGGCTTGATCTTAGTAATTCTTGGAAACTGGTTCGAATACCAGACCTTTCCAAGTCCCCGAATATTAAAGAAATAATTCTTTCTGGTTGTAAATCCCTTACAAGACTTCCAATCAATCTTTTTAAGTTGAAATTTCTTGAAAGACTTAATCTGAGTGGTTGCTCAAATGTGGAAAATATCCCTGAAATCAAGGAGACAATGGAAAATTTAGCGGTGCTTGTCTTAAAACAAACAGCAATACAGGAACTACCTTCATCCTTGAACCATTTGGTGGGGCTTGAAGAATTGAGCTTGAAGTTTTGCTCCAAGCTTGAGAGTATTCCCTCTTCGATTGGAACACTCACCAAACTCTGCAAATTAGACCTTACCTACTGTGAATCACTTGAAACTTTTCCCGGCAGCATTTTCGATCTGAAGTTGACAAAACTTGATTTGAATGATTGCTCAAGGCTAAAGACCTTCCCAGCGATCTTGGAACCTGCAGAAAGTTTTGCTCACATTAGCTTAGCAGAAACAGCAATTAAAAAACTACCTTCATCCCTGCAAAATTTGGTGGGTCTTCAAACCTTGTGTCTGAAGGAGTGCCCTGACCTGGAGTCACTTCCAAACAGCATTTGCAATCTAAAGCTTCTCTCTGAGCTTGACTGTTCAGGCTGTCGTAAATTAACAGGAATCCCAAATGACATAGGTTGCTTGTCATCATTAAGGACATTGTCACTGCAAGATACCGGAGTTGTGAACCTTCCAGAGAGTATTGCTCATCTTTCAAGCTTGGAATCACTTGATGTAAGTTATTGCAGAAAGCTGGAGTGTATCCCACATCTTCCTCCATTTATGAAACAGTTATTGGCATTTCACTGCCCATCCATTAGAAGCGTGATGTCGAATTCAAGGTTCCTGTCAGATTCCAAAGAGGGTACCTTCGAACTTTACTTCACCAATAATGAAAAACAGGATCCAGGTGCTCAAAGGGATGTTGTCCGCAATGCAGAGCATAGGATCACTGATGTTGCATGTAGGTTTGCGTTCTATTGCTTTCCAGGGAGTGAAGTTCCTAATTGGTTCCACCATCATTGCAAGAGAAATTCAGTTACTGTGGATAAAGATTCTCTAAATTTGTCCAATGATAATAGGATCATTGGTTTTGCTATGTGTTTTGTTTTGCAACTTGAAGATATGAATTATACAGGATACAGATTTAGTAACTTCAGATGCAGATTAACATTTGAATCTGATGGTCAGACACACATCCTTCCCATCGATGATCAGCTAAACAACTCTTTGCATCAGATCGATCTTCGAGTAGGACATCTCGTGCGAGATCATACATTTATATGGAACTATTACTTAATGGACTCTGCAAGCAACCACAATGGGATAATTCATGCCCACAACTTCACTTTTGAGATCAGCAATGGGCTGTATCTTAAATCAAGTTCTTTGGTGAAAGAGTGCGGAATATACCCTCTTTATAGAAAAGAAAAAGATGATGATGATGGTAGGTACGTCTAG 2895 0.3896 MLIDRIAQDIFKKLNPPFSQGMLGIDKHIAQIQSLLQLDSEAVRIIGICGMGGIGKSTLAEALYHKLGTQFSSRCLIVNAQQKIDRYGIYSLRKKYLSKLLGEDIQSNGLNYAIERVKRAKVLLILDDLKISIPILELIGGHGNFGQGSRIIVTSRHRHVLKNAEADEIYEVQGMSYQDSLELFRLNAFKEDYPLEGYANLIVEVLKYAKGVPLALQVLGSLLYDKEREVWESELKKLKELPNVDIFDVLKLSYDGLDDEPKDIFLDITCFYAGDFVDKVVELLDSCGFSADIGMDVLKDRGLISILEDRIAVHDLVLEMGREIVRQQCVSDPGKHSHLWNHKEIYHVVRKNKGTDAIQCIFLDMCQIEKVQLHPEIFKSMPNIRMLYFHKHSSFKQGQSNVIVPDLLESLPNGLKVLHWDEFPQRSFPLDFCPEKLVKLHMRESRLEQLWGDDQELPNLERLDLSNSWKLVRIPDLSKSPNIKEIILSGCKSLTRLPINLFKLKFLERLNLSGCSNVENIPEIKETMENLAVLVLKQTAIQELPSSLNHLVGLEELSLKFCSKLESIPSSIGTLTKLCKLDLTYCESLETFPGSIFDLKLTKLDLNDCSRLKTFPAILEPAESFAHISLAETAIKKLPSSLQNLVGLQTLCLKECPDLESLPNSICNLKLLSELDCSGCRKLTGIPNDIGCLSSLRTLSLQDTGVVNLPESIAHLSSLESLDVSYCRKLECIPHLPPFMKQLLAFHCPSIRSVMSNSRFLSDSKEGTFELYFTNNEKQDPGAQRDVVRNAEHRITDVACRFAFYCFPGSEVPNWFHHHCKRNSVTVDKDSLNLSNDNRIIGFAMCFVLQLEDMNYTGYRFSNFRCRLTFESDGQTHILPIDDQLNNSLHQIDLRVGHLVRDHTFIWNYYLMDSASNHNGIIHAHNFTFEISNGLYLKSSSLVKECGIYPLYRKEKDDDDGRYV* 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0135 964 PRINTS Disease resistance protein signature 116 130 - -
Lja4g0135 964 PRINTS Disease resistance protein signature 714 730 - -
Lja4g0135 964 PRINTS Disease resistance protein signature 45 60 - -
Lja4g0135 964 PRINTS Disease resistance protein signature 209 223 - -
Lja4g0135 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 268 IPR027417 -
Lja4g0135 964 Gene3D - 174 261 IPR042197 -
Lja4g0135 964 Gene3D Ribonuclease Inhibitor 337 600 IPR032675 -
Lja4g0135 964 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 521 IPR044974 GO:0006952
Lja4g0135 964 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 553 852 IPR044974 GO:0006952
Lja4g0135 964 Pfam C-JID domain 807 955 IPR045344 -
Lja4g0135 964 SMART AAA_5 42 176 IPR003593 -
Lja4g0135 964 Pfam NB-ARC domain 27 239 IPR002182 GO:0043531
Lja4g0135 964 Gene3D Ribonuclease Inhibitor 601 759 IPR032675 -
Lja4g0135 964 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 2 521 - -
Lja4g0135 964 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 553 852 - -
Lja4g0135 964 SUPERFAMILY L domain-like 314 744 - -
Lja4g0135 964 Gene3D - 3 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0135 Lja-Chr4 1032639 1036962 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0135 2 651 WRKY Transcription Factor Family AT4G12020 34.443 1.02e-95 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0135 - - lja:Lj3g3v0423950.1 1723.37