Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0130 ATGGCAGCTAAAAGGTTTTTGGATGATTCCGATCAAGACAAAGACAAACCAATCGACAAACGCATGAGAACTACAACTACTAGACCTTCTTTTGCTTCGGTAATAGGAGAAGTTGTAATGGTGAAAAACTTGCAGAACCTTTTCTCAGGCTTGGAACCATTGCTGAGAAGAGTGGTGAGTGAAGAGGTGGAGCGAGTGATGAGACATTGTTGTCCACGACCAATGACTAGGTCCCCTTCATTGAGACTCCAAGCATTGGAACAAATACAACCATCAAGCCTTCAGCTCAGGTTCAGCAAAAAGCTTTCACTCCCTATATTCACAGGTAGCAGGATATTGGACATGGACGAAAAACCCATCCATGTGGTTCTTGTTGACAAGAGTAGCGATCAAATAATGGTTCCAACGAGCTTCCAACATCCCATCAAGCTAGAAATTGTGGTGCTTGATGGAGATTTCCCTGATAAGGAGTCATGGACAAGTGAGGAGTTCAACAGGCACATAGTGAAGGAGAGAACAGGGAAGAGGCCATTGCTTGCAGGAGAGCTGAATCTGACCCTGAGGGATGGAATTGCACCCATTGGGGACATAGAGTTCACTGATAATTCTAGCTGGATACGTAGTAGGAAGTTCAGAGTCGCCGTGAGAGTGGCTCCGACCGGCAATAATCCGAGTCTCAGAATCCGTGAAGGCATGACTGACGCTTTTATTGTTAAGGATCACCGCGGTGAATTGTACAAGAAACATCACCCACCAATGCTCCATGATGAAGTGTGGCGCCTAGAGAAGATTGGGAAAGATGGAGCTTTCCACAAAAAATTGTCCTCAGAGCGAATAACCACAGTGCAAGACTTTCTCAAGTTATCTGTTGTTGATCCACAAAGGCTCAGAAAGATTTTAGGCATTGGAATGTCAGAGAGAATGTGGGAAGTGACAATGAAGCATGCAAAGACTTGCAACATGGGCAACAAGCTCTACATCCACCGTGGTCCTCAATTTACCATTATTCTGAATGGCATATGCCAGTTGGTTAAAGCTGAAATCAATGGACAAATCTTTCCAGCTAGAGAACTGAACAACATGAACAGGAGCTATATAGAGAAATTGGTTAGAGAAGCATATGCTAGATGGAATAACTTGGAGGAAATCGATGGGGTCATGAATGATAATGTTGCTTTGTTAACCCAAGGTGAAACTGGGGACCAATTTCCAAACAATCATCAAGCATTGGTAATGGCATCATGCAATCAGAACGATTATTTTGGTGATAAATCTGCAGAGGGTGGTAGCTATGTACCTAGCCAAAGTGCACAAATAGGGTGCAGCGAATGGCCAATGAATGCAACATTTGCCGCAGGATCATTCATGAATGCCATGCCTTACAGCTTCTCAGAGTCACAAACAGACGGTGACATAACACCCTCAGGTTCTGGTTCTGGCATTGATGGAGCTGCAAGGTGGAATTAG 1467 0.4424 MAAKRFLDDSDQDKDKPIDKRMRTTTTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVSEEVERVMRHCCPRPMTRSPSLRLQALEQIQPSSLQLRFSKKLSLPIFTGSRILDMDEKPIHVVLVDKSSDQIMVPTSFQHPIKLEIVVLDGDFPDKESWTSEEFNRHIVKERTGKRPLLAGELNLTLRDGIAPIGDIEFTDNSSWIRSRKFRVAVRVAPTGNNPSLRIREGMTDAFIVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSSERITTVQDFLKLSVVDPQRLRKILGIGMSERMWEVTMKHAKTCNMGNKLYIHRGPQFTIILNGICQLVKAEINGQIFPARELNNMNRSYIEKLVREAYARWNNLEEIDGVMNDNVALLTQGETGDQFPNNHQALVMASCNQNDYFGDKSAEGGSYVPSQSAQIGCSEWPMNATFAAGSFMNAMPYSFSESQTDGDITPSGSGSGIDGAARWN* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0130 488 MobiDBLite consensus disorder prediction 1 20 - -
Lja4g0130 488 MobiDBLite consensus disorder prediction 465 488 - -
Lja4g0130 488 PANTHER PROTEIN, PUTATIVE-RELATED 1 480 - -
Lja4g0130 488 PANTHER OS02G0177800 PROTEIN 1 480 IPR012416 GO:0005516
Lja4g0130 488 Pfam Calmodulin binding protein central domain 253 319 IPR046830 -
Lja4g0130 488 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Lja4g0130 488 Pfam Calmodulin binding protein C-terminal domain 324 383 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0130 Lja-Chr4 998009 1002933 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0130 3 385 Calmodulin-binding Proteins AT5G57580 48.969 1.65e-118 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0130 - - gmx:100802257 685.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0130 4 998009 1002933 Lja2g2113 2 23426905 23431233 PCT