Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0072 ATGGCTGCAGCAGCAGGAGCAGGAGCAGGAGCTTTGGAGCAGGTGCAGTGCTTCGGCCGGAAGAAGAATGCTGTCGCCGTCACCTACTGCAAGAGAGGCCGTGGTCTCATCAAGATCAACGGCTGCCCAATCGAGCTCATCCAGCCGGAGATCCTCCGCTTCAAGGCGTTCGAGCCCATCCTCCTCCTTGGACGCCACCGCTTCGCTGGCGTTGACATGCGCATCCGTGTGAAGGGTGGAGGTCACACCTCACAGATCTATGCCATCCGTCAGAGCATCGCGAAGGCCCTTGTTGCATACTACCAGAAGTATGTGGATGAGCAGAGCAAGAAGGAGATCAAGGATATCCTCATCCGCTACGATCGTACTCTCCTCGTCGCTGATCCCAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGTTCTAGGTTCCAGAAGTCCTACCGTTGA 456 0.5768 MAAAAGAGAGALEQVQCFGRKKNAVAVTYCKRGRGLIKINGCPIELIQPEILRFKAFEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILIRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0072 151 Gene3D - 7 151 IPR014721 -
Lja4g0072 151 PANTHER - 8 151 - -
Lja4g0072 151 SUPERFAMILY Ribosomal protein S5 domain 2-like 14 151 IPR020568 -
Lja4g0072 151 ProSitePatterns Ribosomal protein S9 signature. 79 97 IPR020574 GO:0003735|GO:0005840|GO:0006412
Lja4g0072 151 PANTHER RIBOSOMAL PROTEIN S9 8 151 IPR000754 GO:0003735|GO:0005840|GO:0006412
Lja4g0072 151 Pfam Ribosomal protein S9/S16 19 151 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0072 Lja-Chr4 587683 588413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0072 7 151 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.276 8.02e-94 266