Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0031 ATGGGTGGTGGAGGAACAATCACACAAGGTCTTCGTCGCTTGTTTCAACGACGCGCTCCTCCTTCTTCCTCTCTTGCTGACGATGACAACAATGACCGTGTCTTCTTGAGAGATTTGCGGGCACAACTGGCTTCTATTCCCACTCAGGACCACCAAACACTACCCCCCATTCACCAACACTTTGATATCTCTTCCTTGAAACCCATCAGAGTCCCTACGCCCGCCCTCTTCCCATTTTCTTCCATGGATCCTCACAAAAAGGGCGCGCAGGAATCAGAGTTTTTTACTGAGTATGGAGAGGCAAATCAGTACCAGATCCAAGAAGTCGTTGGAAAAGGAAGCTATGGTATTGTGGGTTCTGCCATTGACACCCGCACTGGTGAAAAGGTTGCCATCAAGAAGATTCATGACGTTTTTGAGCATGTGTCGGATGCCACGCGGATCCTTAGAGAGATTAAACTCTTGCGATTGCTCCGGCATCCTGATATTGTGGAGATTAAGCACATCATGCTTCCTCCTTCGCGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCAGACCTCCATCAAGTTATCAAGGCAAATGATGATCTTACTCCTGAGCACCACCAATTCTTCTTGTATCAGCTTCTTCGGGGCCTCAAGTATATACATACAGCAAATGTTTTCCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAATGCTGATTGCAAACTAAAGATATGTGATTTTGGGCTTGCTAGAGTTTCATTTAATGATGCTCCATCAGCTATATTCTGGACTGATTATGTTGCAACCCGGTGGTACCGTGCACCTGAACTATGTGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCTCTGGGAAGCCATTGTTTCCTGGGAAAAATGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGAACTCCTCCTCCTGAATCCACTGCAAGGATTCGAAATGAGAAAGCTAGAAGGTATCTTAGTAGCATGAGAAAAAAACAACCTGTTCCATTCTCCCAGAAATTTCCAAATGCAGATCCTTTGGCACTGCGTTTACTGGAGCGCCTACTTGCATTTGATCCTAAAGACCGTCCAACAGCTGAAGAGGCACTAGCTGATCCTTATTTCAATGGTTTGGCAAATGTGGATCGTGAACCATCCACTCAACCCATTTCAAAACTTGAATTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAGATGCTCCAGGAGTATCTTCGTGGTGGAGATCAAATCAGCTTCATGTATCCAAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGACCAAGGGAAAGGTGAGCGAAGCTCCCCATTGCAGAGACAGCATGCCTCCTTACCTAGGGAGCGAGTCACTACTTCCAAGGATGAAAGTAATCAAAACAACGATGATGAAAGGCCAAGTGGGTCAAATCTTCATAGTCCTCCAGGGCCTAATGAGACAAATGCTGGAAACTCAGACGCTCAAAATGGACCCTCCAAGTCCAACTATAGTGCACGCTGCCTGTTGAAGAGTGCCAGCATTAGTGCTTCAAAGTGCATAGATGTGAAACAAAAGAAGGAACCAGAGGAGCCAATTGTGGAGGAGGTCAATGAGGAGGAAGTGGATGGTTTGACAGAAAAAATTGCTAATGCTATCATCCATGCTTAG 1782 0.4473 MGGGGTITQGLRRLFQRRAPPSSSLADDDNNDRVFLRDLRAQLASIPTQDHQTLPPIHQHFDISSLKPIRVPTPALFPFSSMDPHKKGAQESEFFTEYGEANQYQIQEVVGKGSYGIVGSAIDTRTGEKVAIKKIHDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPPESTARIRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFNGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQISFMYPSGVDRFKRQFAHLEDQGKGERSSPLQRQHASLPRERVTTSKDESNQNNDDERPSGSNLHSPPGPNETNAGNSDAQNGPSKSNYSARCLLKSASISASKCIDVKQKKEPEEPIVEEVNEEEVDGLTEKIANAIIHA* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0031 593 ProSiteProfiles Protein kinase domain profile. 104 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0031 593 MobiDBLite consensus disorder prediction 492 507 - -
Lja4g0031 593 ProSitePatterns Protein kinases ATP-binding region signature. 110 134 IPR017441 GO:0005524
Lja4g0031 593 SMART serkin_6 104 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja4g0031 593 MobiDBLite consensus disorder prediction 472 540 - -
Lja4g0031 593 MobiDBLite consensus disorder prediction 1 30 - -
Lja4g0031 593 Gene3D Phosphorylase Kinase; domain 1 120 441 - -
Lja4g0031 593 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 70 522 - -
Lja4g0031 593 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 70 522 - -
Lja4g0031 593 SUPERFAMILY Protein kinase-like (PK-like) 98 400 IPR011009 -
Lja4g0031 593 CDD STKc_TDY_MAPK 103 440 - -
Lja4g0031 593 ProSitePatterns MAP kinase signature. 139 242 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lja4g0031 593 MobiDBLite consensus disorder prediction 508 540 - -
Lja4g0031 593 Gene3D Transferase(Phosphotransferase) domain 1 190 418 - -
Lja4g0031 593 Pfam Protein kinase domain 104 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0031 Lja-Chr4 266227 270678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0031 1 576 MAP Kinase Gene Family AT1G73670 71.453 0.0 826
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lja4g0031 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0031 - - gmx:100795768 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja2g2177 2 24762276 24770378 Lja4g0031 4 266227 270678 ECH
Lja4g0031 4 266227 270678 Lja4g0031 4 266227 270678 ECH