Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g0003 ATGGCTTCTCCACTGCATTCCGATCATGCTATCTTTGAAGACGAGTTTAAGAAAAAAACATGGAAGCAAACAATTCTGGTCTCATTTCAAATAGTTGGAGTAGTTTATGGTCAGCTGAGCACTGCACCCTTATATGTATTTGGGACAATGCAAACGGGAGATCTTACATCAGAGGAGGTTGTTTATGAACTCTTCTCCTTCATTTTTTGGACCCTCACAATTATCTCTTTGCTCAAATATGCCGTTATAGTGCTCCAAGCAGATGATAAAGGAGAGGGTGGTACTTTTGCTTTATATTCACTGTTGTGTAGAAATGCAAAAGTTGGTCTGTTCCCATGTGATAAAACTGCCAATGAGGTGATGCTTTGTGAGGAGAACTCTAAGATCAGTAGTGTCATTAATGTTGATTCAAGAGCACGAAGGACCATTGAGAAACACAAGATCTGTCACTATTTAATACTCTTCACAGCCCTCTTTGGTTCGTGCATCACAATTGGGGTTGCAGTGCTCACTCCAGCCCTTTCAGTGTTATCAGCTTCATATGGTGTTCAGAGATCCTTGTCAGACATGGCTCACATGTTTTCCTCGTCGCAACATACTAAGGATTCCGTGTCAGAGGCTCTAAAAAGATATGTACCTGTTCCCTGTGCGTGTGCTATATTGGTTGGGCTGTTCATGTTGCAGCCCTGCGGTACACGGAAAATTGGGTTCATGTTTGCTCCAATTATTGCTTTTTGGCTGGTGTTTGTTGGTGCGGTGGAAACGTATAATATTTTCTACTGGGATGCAAAAATTATGTATAAAATATCCCCAGTATACTTGATCAGATTTATCACAAACATTGACACCAGCAGATGGAGGTTGTTAGGGAGCGTCATTCTATGCGCAGCAGGATCAGAGGCAATGTTTGCAGGCCTAGGCCATTTCTCCAAGAAATCAATTAAGATAACATTTATATGCTTGATCTATCCTCTTCTCGTTTTATGCTATGCTGGCCAGGCTGCATATATCTCCAAAAATTTACACACTCATGATGATTTTAATCATCTCAGTGAATCCATGCCGCGTCATTTTAAACATTTGTTCCTTGTATTGTCTCTGCTTTCTTCTGCTGTGGGAAGCCAAGCAACCATAACAGCATGCTTCTCCATCATTAACCAGTGCCTGGCCCTCAATTGCTTTCCAAGAGTAAAAGTTATTCACACATCAAAAACCACACATGGCCAGATTTACATCCCTGATGTCAACTGGTTATTGATGTTTTTCAGCCTCACTGTCACTGTTACTTTCGGAGGAGATTTGGTCAAGATTGGCAATGCCACAGGTTTGGCTATAGATTGTGGAATGCTGGTGACAACTAGCCTGATGTCAATTATCATTGCTTTGTACTGGGAAAAGAATTTGATTCTATCAGCTTGCTTTCTTGTATTCTTTGGCTTTCTTGAGGCTGCATATCTTTCAGCCTGCATGCTGCAATTTCACAGGGGAGCTTGGTATCTGGTTGTCCTTTTGGCTGTATCGATGACAATCATGATTTCATGGCATTATGGAACTATGAAGAAGTATGAATTTGATTTGCATAACAAGGTCTCAACTGAATGGCTAATAGATGTTAGTCCAGGCCTTGGAATTTCCAGAGTACCTGGAATTGGCTTCATTTACACTGACATAGTGGCAGGAATCCCAGCTTTCTTTTCACATTTCATCACTAATCTCCCTGCATTTCATCAAGTGCTCATCTTGGTGTCCTTCAAGTCTATACCGGTGCCTCACGTCCCGGAAAGTGAAAGGTACCTCATAGGAAGGATTGGGCCGAAAGATTATAAAATTTATCGTTGTATTGTCAGGTGTGGATATTGTGATAATGTCAGGGATACAGATGATTTTGAGGAGCAGATTATTCGTTCTATAGGGGAATTCATTTCCATTGATCAAAGTGACATTGAATCCATGGTTTCCCAACACGAAAGAATGATAGTTGTGGGAAATTCTGCACCAGAAGAAAATGCTTTAGTTCCTCTGGATGAAATTGTTCCATGTATGGGCCCGAACAAGGAATCTCAGATTAGCCCCGTTGGTGGGGATGCAGCATTGCCATTGGAGAGTAGTAGTAGTGGTGCTTGCAAGAGAAAAAAGGTTCGATTCATGTTGCCTGCTAATAGTCCTAAAATGCAGGTATCTGTTAGGAAAGAGCTGTTGGAACTAATTGAAGCAAGGGAGAGTGGCAGTGCCTATTTCTTGGGCCAGTCACATTTGGTGGTGAGTGAAGGCTCAAACATTCTCAAGAAATTCTTAATCATGGCCTATAGTTTCAGTGAAAAGAATTGTCGAGAACCTCCTGTGGCTCTTAAAATCCCTCATGCTGCCCTTGTAGAAGTTGGTATGGTATGTAGCATATAA 2400 0.415 MASPLHSDHAIFEDEFKKKTWKQTILVSFQIVGVVYGQLSTAPLYVFGTMQTGDLTSEEVVYELFSFIFWTLTIISLLKYAVIVLQADDKGEGGTFALYSLLCRNAKVGLFPCDKTANEVMLCEENSKISSVINVDSRARRTIEKHKICHYLILFTALFGSCITIGVAVLTPALSVLSASYGVQRSLSDMAHMFSSSQHTKDSVSEALKRYVPVPCACAILVGLFMLQPCGTRKIGFMFAPIIAFWLVFVGAVETYNIFYWDAKIMYKISPVYLIRFITNIDTSRWRLLGSVILCAAGSEAMFAGLGHFSKKSIKITFICLIYPLLVLCYAGQAAYISKNLHTHDDFNHLSESMPRHFKHLFLVLSLLSSAVGSQATITACFSIINQCLALNCFPRVKVIHTSKTTHGQIYIPDVNWLLMFFSLTVTVTFGGDLVKIGNATGLAIDCGMLVTTSLMSIIIALYWEKNLILSACFLVFFGFLEAAYLSACMLQFHRGAWYLVVLLAVSMTIMISWHYGTMKKYEFDLHNKVSTEWLIDVSPGLGISRVPGIGFIYTDIVAGIPAFFSHFITNLPAFHQVLILVSFKSIPVPHVPESERYLIGRIGPKDYKIYRCIVRCGYCDNVRDTDDFEEQIIRSIGEFISIDQSDIESMVSQHERMIVVGNSAPEENALVPLDEIVPCMGPNKESQISPVGGDAALPLESSSSGACKRKKVRFMLPANSPKMQVSVRKELLELIEARESGSAYFLGQSHLVVSEGSNILKKFLIMAYSFSEKNCREPPVALKIPHAALVEVGMVCSI* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g0003 799 Pfam K+ potassium transporter 29 620 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g0003 799 PANTHER POTASSIUM TRANSPORTER 12 798 - -
Lja4g0003 799 TIGRFAM kup: potassium uptake protein 28 799 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g0003 799 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 12 798 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g0003 Lja-Chr4 24229 28693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g0003 17 799 Inorganic Solute Cotransporters AT1G70300 44.070 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g0003 K03549 K12236 gmx:100801073 1247.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g0003 4 24229 28693 Lja4g0003 4 24229 28693 ECH